RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 C11orf88Q6PI97 169 aa13.37□□□□□ -0.27
PABPC1-201ENST00000318607 OR4D9Q8NGE8 314 aa13.37□□□□□ -0.27
PABPC1-201ENST00000318607 ECHDC3Q96DC8 303 aa13.37□□□□□ -0.27
PABPC1-201ENST00000318607 WDR89Q96FK6 387 aaPredicted RBP13.37□□□□□ -0.27
PABPC1-201ENST00000318607 TMEM43Q9BTV4 400 aa13.37□□□□□ -0.27
PABPC1-201ENST00000318607 SAV1Q9H4B6 383 aaPredicted RBP13.37□□□□□ -0.27
PABPC1-201ENST00000318607 ZNF334Q9HCZ1 680 aaPredicted RBP13.37□□□□□ -0.27
PABPC1-201ENST00000318607 TM7SF3Q9NS93 570 aa13.37□□□□□ -0.27
PABPC1-201ENST00000318607 FKBP14Q9NWM8 211 aa13.37□□□□□ -0.27
PABPC1-201ENST00000318607 ZMAT5Q9UDW3 170 aaKnown RBP13.37□□□□□ -0.27
PABPC1-201ENST00000318607 CHD5Q8TDI0 1954 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 DAPL1A0PJW8 107 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 FMO6PO60774 539 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 SOX30O94993 753 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 HLA-DPB1P04440 258 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ARAFP10398 606 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 NPPBP16860 134 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 TBXA2RP21731 343 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 NAA10P41227 235 aaPredicted RBP13.36□□□□□ -0.27
PABPC1-201ENST00000318607 SLC1A3P43003 542 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 RGS8P57771 180 aaPredicted RBP13.36□□□□□ -0.27
PABPC1-201ENST00000318607 CRHR2Q13324 411 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ATXN7L3Q14CW9 347 aaPredicted RBP13.36□□□□□ -0.27
PABPC1-201ENST00000318607 CCNJQ5T5M9 372 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ZBTB37Q5TC79 503 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 CST9Q5W186 159 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 NKAIN4Q8IVV8 208 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 CHTF18Q8WVB6 975 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ELMOD3Q96FG2 381 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 PPP1R16AQ96I34 528 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 SEC22CQ9BRL7 303 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 NFKBIL1Q9UBC1 381 aaPredicted RBP13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ZNF69Q9UC07 566 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 FXYD6-FXYD2A0A087WZ82 144 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 IQCMA0A1B0GVH7 501 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 B8ZZF3 427 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 CHP2O43745 196 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 MRPS14O60783 128 aaKnown RBP13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ALPPP05187 535 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 GKN3PP0CG01 181 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 LIMS3P0CW19 117 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 LIMS4P0CW20 117 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 SAGP10523 405 aaPredicted RBP13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ANXA3P12429 323 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 HMGA1P17096 107 aaKnown RBP13.36□□□□□ -0.27
PABPC1-201ENST00000318607 TRIM23P36406 574 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 EVX1P49640 407 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 MAP2K6P52564 334 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 C22orf39Q6P5X5 142 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 TEX261Q6UWH6 196 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 SLCO4C1Q6ZQN7 724 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 C17orf107Q6ZR85 190 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ZNF767PQ75MW2 155 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 SIAH3Q8IW03 269 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 GIMAP1Q8WWP7 306 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 GINS4Q9BRT9 223 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 FUZQ9BT04 418 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 FXYD6Q9H0Q3 95 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 DMRT3Q9NQL9 472 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ASIC5Q9NY37 505 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 U3KQ87 197 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 E9PI62 339 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 SRPRAP08240 638 aaKnown RBP13.36□□□□□ -0.27
PABPC1-201ENST00000318607 CTGFP29279 349 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ILKQ13418 452 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 TRIM71Q2Q1W2 868 aaKnown RBP13.36□□□□□ -0.27
PABPC1-201ENST00000318607 SFRP5Q5T4F7 317 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 LYPLAL1Q5VWZ2 237 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 GRHL2Q6ISB3 625 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 C9orf62Q8N4C0 152 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 OR8D4Q8NGM9 314 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 TRMT10AQ8TBZ6 339 aaKnown RBP13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ATF6BQ99941 703 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.272e-7■■■□□ 16.8
PABPC1-201ENST00000318607 SLC25A18Q9H1K4 315 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 AUNIPQ9H7T9 357 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 TAS2R7Q9NYW3 318 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 KLHL21Q9UJP4 597 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 FBXL4Q9UKA2 621 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 TRAPPC4Q9Y296 219 aa13.36□□□□□ -0.27
PABPC1-201ENST00000318607 ANTXRLA6NF34 631 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 CLTBP09497 229 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 RPL35P42766 123 aaKnown RBP13.35□□□□□ -0.27
PABPC1-201ENST00000318607 MORN1Q5T089 497 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 LIPIQ6XZB0 460 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 TMEM91Q6ZNR0 172 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 KIF18BQ86Y91 864 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 ARL14Q8N4G2 192 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 LSM2Q9Y333 95 aaKnown RBP13.35□□□□□ -0.27
PABPC1-201ENST00000318607 IRAK3Q9Y616 596 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 A0A087WUU8 490 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 ARPC5O15511 151 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 GPR1P46091 355 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 GCGRP47871 477 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 PER3P56645 1201 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 MGAT3Q09327 533 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 MELKQ14680 651 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 LRRC37A5PQ49AS3 106 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms