RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 C12orf29Q8N999 325 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 SLC37A3Q8NCC5 494 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 KLHDC9Q8NEP7 349 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 ITFG2Q969R8 447 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 HSFY1Q96LI6 401 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 CNPY3Q9BT09 278 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 NEUROG2Q9H2A3 272 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 DPEP3Q9H4B8 488 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 EGLN3Q9H6Z9 239 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 FAM212BQ9NTI7 297 aaPredicted RBP3.57□□□□□ -1.84
SMCO3-201ENST00000316048 ZDHHC18Q9NUE0 388 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.57□□□□□ -1.84
SMCO3-201ENST00000316048 HMGXB4Q9UGU5 601 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 CYTH4Q9UIA0 394 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 PILRBQ9UKJ0 227 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 SH3GLB1Q9Y371 365 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 hCG_1818297A0A087WSY0 165 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CYB561D2O14569 222 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CHUKO15111 745 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 LRCH4O75427 683 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 DFFBO76075 338 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CHRNA1P02708 482 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 GHRP10912 638 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ETS1P14921 441 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CAPN2P17655 700 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 AMD1P17707 334 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 WARSP23381 471 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ADORA2BP29275 332 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 MIPP30301 263 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CDKN2BP42772 138 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 TNFSF10P50591 281 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 HNRNPFP52597 415 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 RPP38P78345 283 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 OGDHQ02218 1023 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 DMTNQ08495 405 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 TFDP2Q14188 446 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 PDK2Q15119 407 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 TAF13Q15543 124 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 AGBL2Q5U5Z8 902 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 PMF1Q6P1K2 205 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 DHRS11Q6UWP2 260 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 FAM183BPQ6ZVS7 135 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 SLC24A5Q71RS6 500 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ARCQ7LC44 396 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 SMIM29Q86T20 159 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ELMOD2Q8IZ81 293 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 TMEM86AQ8N2M4 240 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 HDDC3Q8N4P3 179 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 GBP7Q8N8V2 638 aaPredicted RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 OR2T11Q8NH01 316 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 JOSD2Q8TAC2 188 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 FBXO25Q8TCJ0 367 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 RAET1EQ8TD07 263 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 RXFP2Q8WXD0 754 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 RAPGEF5Q92565 580 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 HAS2Q92819 552 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ATP6V1G3Q96LB4 118 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 GLT1D1Q96MS3 346 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 FAM111AQ96PZ2 611 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CDCA3Q99618 268 aaPredicted RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 PKP2Q99959 881 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CCDC77Q9BR77 488 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 STMN4Q9H169 189 aaPredicted RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CXCL16Q9H2A7 254 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CENPHQ9H3R5 247 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 TMBIM4Q9HC24 238 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 FAM49BQ9NUQ9 324 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 RNF186Q9NXI6 227 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ACTR3BQ9P1U1 418 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 UBQLN2Q9UHD9 624 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 PCSK1NQ9UHG2 260 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 RABL2BQ9UNT1 228 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CITO14578 2027 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 IGHV4-61A0A0C4DH41 118 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 RGSL1A5PLK6 1076 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ARL5CA6NH57 179 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 SRRM4A7MD48 611 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ZNF732B4DXR9 585 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 SGK1O00141 431 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 TXNL1O43396 289 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 BUB3O43684 328 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 SCO2O43819 266 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CST8O60676 142 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 IGHV4-59P01825 116 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 MT-ND2P03891 347 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ZCCHC18P0CG32 403 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CA6P23280 308 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 LMO2P25791 158 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 AKT2P31751 481 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 STIP1P31948 543 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 OR1D2P34982 312 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 RPL34P49207 117 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CNN1P51911 297 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 ACLYP53396 1101 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 VCPP55072 806 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 CDH6P55285 790 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 LINC01547P58512 204 aaPredicted RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 SLC25A11Q02978 314 aaKnown RBP3.56□□□□□ -1.84
SMCO3-201ENST00000316048 KRT81Q14533 505 aa3.56□□□□□ -1.84
SMCO3-201ENST00000316048 KCTD16Q68DU8 428 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms