RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 XKR5Q6UX68 686 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 VWA5B2Q8N398 1253 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 FAM83FQ8NEG4 500 aaPredicted RBP14.74□□□□□ -0.05
HCFC1-201ENST00000310441 BTBD17A6NE02 478 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 CA12O43570 354 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 WDR4P57081 412 aaKnown RBP14.74□□□□□ -0.05
HCFC1-201ENST00000310441 ELAVL3Q14576 367 aaKnown RBP14.74□□□□□ -0.05
HCFC1-201ENST00000310441 SLC2A12Q8TD20 617 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 C16orf78Q8WTQ4 265 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 KITLGP21583 273 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 PKLRP30613 574 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 TMEM115Q12893 351 aaPredicted RBP14.74□□□□□ -0.05
HCFC1-201ENST00000310441 KCNAB2Q13303 367 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 GPM6BQ13491 265 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 TMEM53Q6P2H8 277 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 SLC22A25Q6T423 547 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 SCAMP5Q8TAC9 235 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 KLK6Q92876 244 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 MUS81Q96NY9 551 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 MED1Q15648 1581 aaPredicted RBP14.74□□□□□ -0.05
HCFC1-201ENST00000310441 TGFBR3Q03167 851 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 TTLL10Q6ZVT0 673 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 GCM1Q9NP62 436 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 HRASLS2Q9NWW9 162 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 RAB3AP20336 220 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 KLBQ86Z14 1044 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 LMX1AQ8TE12 382 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 MR1Q95460 341 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 PRMT8Q9NR22 394 aaPredicted RBP14.74□□□□□ -0.05
HCFC1-201ENST00000310441 TRIP12Q14669 1992 aaPredicted RBP14.74□□□□□ -0.05
HCFC1-201ENST00000310441 NFKBIEO00221 500 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 PRAMEF11O60813 436 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 ZNF254O75437 659 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 ELP2Q6IA86 826 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 IRF2BP1Q8IU81 584 aa14.74□□□□□ -0.05
HCFC1-201ENST00000310441 TEX10Q9NXF1 929 aaPredicted RBP14.74□□□□□ -0.05
HCFC1-201ENST00000310441 MAS1P04201 325 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 DCNP07585 359 aaKnown RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 SYPP08247 313 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 HBG1P69891 147 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 HBG2P69892 147 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 SF3A2Q15428 464 aaKnown RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 CMPK2Q5EBM0 449 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 C6orf136Q5SQH8 315 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 LBX2Q6XYB7 198 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 IDO2Q6ZQW0 420 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 KBTBD6Q86V97 674 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 ZNF689Q96CS4 500 aaPredicted RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 TMEM74Q96NL1 305 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 AMDHD1Q96NU7 426 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 RANBP9Q96S59 729 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 CDH20Q9HBT6 801 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 GMEB2Q9UKD1 530 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 FANCGO15287 622 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 CRTAPO75718 401 aaPredicted RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 APLNRP35414 380 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 SOWAHAQ2M3V2 549 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 CATSPEREQ5SY80 951 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 Q6ZVU0 165 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 TXNDC5Q8NBS9 432 aaKnown RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 SLC1A7O00341 560 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 PTHP01270 115 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 PIGRP01833 764 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 OR1E2P47887 323 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 PRRT3Q5FWE3 981 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 DPY19L4Q7Z388 723 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 MYADMQ96S97 322 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 OR10A5Q9H207 317 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 OR10A2Q9H208 303 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 C14orf119Q9NWQ9 140 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 NKX1-2Q9UD57 310 aaPredicted RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 SUSD2Q9UGT4 822 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 ATP6V1G2-DDX39BF2Z307 99 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 SOCS2O14508 198 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 UGDHO60701 494 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 MAP2K4P45985 399 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 RPS15P62841 145 aaKnown RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 SRPXP78539 464 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 APOFQ13790 326 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 PCBP2Q15366 365 aaKnown RBP eCLIP14.73□□□□□ -0.051e-8■■■■□ 23.5
HCFC1-201ENST00000310441 SULF2Q8IWU5 870 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 HERPUD2Q9BSE4 406 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 KCNIP2Q9NS61 270 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 WDPCPO95876 746 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 NR0B1P51843 470 aaKnown RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 BATFQ16520 125 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 MS4A13Q5J8X5 152 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 RBMXL1Q96E39 390 aaKnown RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 BCO2Q9BYV7 579 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 Q9Y3F1 56 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 CHRNA4P43681 627 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 UBXN10Q96LJ8 280 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 A0A0G2JLL6 359 aaPredicted RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 H3BSH0 61 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 RETP07949 1114 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 WNT4P56705 351 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 PRRT2Q7Z6L0 340 aaPredicted RBP14.73□□□□□ -0.05
HCFC1-201ENST00000310441 CNIH3Q8TBE1 160 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 PTCHD1Q96NR3 888 aa14.73□□□□□ -0.05
HCFC1-201ENST00000310441 MS4A4EQ96PG1 132 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms