RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 KCND3Q9UK17 655 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 ELF5Q9UKW6 265 aaPredicted RBP9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 J3KTA2 159 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 TLR4O00206 839 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 ADAP00813 363 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 IL9P15248 144 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 GABRG2P18507 467 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 TNNI3P19429 210 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 ACADLP28330 430 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 PCBP3P57721 371 aaKnown RBP9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 ILKQ13418 452 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 TYW3Q6IPR3 259 aaKnown RBP9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 TRIM40Q6P9F5 258 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 TAGAPQ8N103 731 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR7G3Q8NG95 312 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR9Q1Q8NGQ5 310 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 PTP4A1Q93096 173 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 NEIL2Q969S2 332 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 MARC2Q969Z3 335 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 REPS1Q96D71 796 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 AHCYL2Q96HN2 611 aaKnown RBP9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 ZNF514Q96K75 400 aaPredicted RBP9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 CDX2Q99626 313 aaPredicted RBP9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 C11orf54Q9H0W9 315 aaPredicted RBP9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR52A5Q9H2C5 316 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 SPNS1Q9H2V7 528 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 MIXL1Q9H2W2 232 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 NMNAT1Q9HAN9 279 aaPredicted RBP9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 DCAF16Q9NXF7 216 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 PTTG3PQ9NZH4 202 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 NUFIP1Q9UHK0 495 aaKnown RBP9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 PRELID3BQ9Y3B1 194 aa9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 RPL36Q9Y3U8 105 aaKnown RBP9.72□□□□□ -0.85
APOBEC3F-201ENST00000308521 FAM170BA6NMN3 283 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR52A4PA6NMU1 304 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 TSPAN4O14817 238 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 TPST2O60704 377 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 PRAMEF10O60809 474 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 PTP4A3O75365 173 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 CEACAM5P06731 702 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 CSF3P09919 207 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 OSMP13725 252 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 POU2F1P14859 743 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 RAB3AP20336 220 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 CPN2P22792 545 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 TIA1P31483 386 aaKnown RBP eCLIP9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 GBX2P52951 348 aaPredicted RBP9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 TBPL1P62380 186 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 CDK6Q00534 326 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 COL9A2Q14055 689 aaPredicted RBP9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 FAM131AQ6UXB0 335 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 UTS2BQ765I0 119 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 TMPRSS11BQ86T26 416 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 ENKURQ8TC29 256 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 CREB3L4Q8TEY5 395 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 RLN3Q8WXF3 142 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 LINC00615Q96LM1 132 aaPredicted RBP9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 SLC35A5Q9BS91 424 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 APOOQ9BUR5 198 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 REEP4Q9H6H4 257 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 PRDM6Q9NQX0 595 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 PHPT1Q9NRX4 125 aaPredicted RBP9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 EXO1Q9UQ84 846 aaKnown RBP9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 NCKAP1Q9Y2A7 1128 aa9.71□□□□□ -0.85
APOBEC3F-201ENST00000308521 TRBV23OR9-2A0A075B6M9 112 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF98A6NK75 572 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 PCP4L1A6NKN8 68 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 PPM1BO75688 479 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 ETHE1O95571 254 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 ARAFP10398 606 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 SOX3P41225 446 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 HBA1P69905 142 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 MRPS21P82921 87 aaKnown RBP9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 BTBD16Q32M84 506 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF385BQ569K4 471 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 C12orf73Q69YU5 71 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF852Q6ZMS4 543 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC34A3Q8N130 599 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 LILRB2Q8N423 598 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 FAM160A2Q8N612 972 aaPredicted RBP9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR9A1PQ8NGU1 263 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 INTS12Q96CB8 462 aaKnown RBP9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 TRMT61AQ96FX7 289 aaKnown RBP9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 FYTTD1Q96QD9 318 aaKnown RBP9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 FERD3LQ96RJ6 166 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 DCLRE1CQ96SD1 692 aaKnown RBP9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 MED18Q9BUE0 208 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 SGK2Q9HBY8 427 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 FGF22Q9HCT0 170 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 ABCB9Q9NP78 766 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 EMC3Q9P0I2 261 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 REV1Q9UBZ9 1251 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 CLEC2DQ9UHP7 191 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 FKBP7Q9Y680 259 aa9.71□□□□□ -0.86
APOBEC3F-201ENST00000308521 C17orf113A0A1B0GUU1 675 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 FABP12A6NFH5 140 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 C19orf67A6NJJ6 358 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 PRSS44E7EML9 344 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 CKMT1AP12532 417 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 NPPBP16860 134 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms