RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 RIDAP52758 137 aaKnown RBP10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 MAD2L1BPQ15013 274 aaPredicted RBP10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 SCGB2B2Q4G0G5 96 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 NKAPLQ5M9Q1 402 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 ZNF595Q8IYB9 648 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 WDR20Q8TBZ3 569 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 SPTSSAQ969W0 71 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 RTP4Q96DX8 246 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 TMEM80Q96HE8 168 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 PRRX2Q99811 253 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 TRNAU1APQ9NX07 287 aaKnown RBP10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 KLF11O14901 512 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 FMO6PO60774 539 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 PNMTP11086 282 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 CCR2P41597 374 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 PGBD5Q8N414 524 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 FRMD1Q8N878 549 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 SPHK1Q9NYA1 384 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 CBLCQ9ULV8 474 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 DHDHQ9UQ10 334 aa10.11□□□□□ -0.79
SYNPO2-201ENST00000307142 FAM240BA0A1B0GVZ2 78 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 G3V3Y1 287 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 MAPK3P27361 379 aaPredicted RBP10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 AQP4P55087 323 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 RAB15P59190 212 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 PRDX1Q06830 199 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 GINS1Q14691 196 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 MLC1Q15049 377 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 RGS21Q2M5E4 152 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 DCST2Q5T1A1 773 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 BCL2L15Q5TBC7 163 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 SSX6Q7RTT6 188 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 PIGWQ7Z7B1 504 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 SLC37A2Q8TED4 501 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 KCTD7Q96MP8 289 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 EEDO75530 441 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 FESP07332 822 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 GKN3PP0CG01 181 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 FPR1P21462 350 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 EIF2B2P49770 351 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 GAS6Q14393 721 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 RELL1Q8IUW5 271 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 CDCP1Q9H5V8 836 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 AGPAT4Q9NRZ5 378 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 ZCWPW2A0A1B0GU75 182 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 PLSCR5A0PG75 271 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 TOR1BO14657 336 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 DHFRP00374 187 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 GRK5P34947 590 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 MECP2P51608 486 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 STON2Q8WXE9 905 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 FCGR1BQ92637 280 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 CRISPLD2Q9H0B8 497 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 CXorf56Q9H5V9 222 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 MTMR10Q9NXD2 777 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 RNF215Q9Y6U7 377 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 RHCEP18577 417 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 AHRP35869 848 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 ACVR1BP36896 505 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 DAP3P51398 398 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 CDKL4Q5MAI5 379 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 OGFOD2Q6N063 350 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 ZNF782Q6ZMW2 699 aaPredicted RBP10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 SYT14Q8NB59 555 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 KDM1BQ8NB78 822 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 ZNF639Q9UID6 485 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 SLC35A3Q9Y2D2 325 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 ENTPD6O75354 484 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 COL13A1Q5TAT6 717 aaPredicted RBP10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 C9orf135Q5VTT2 229 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 SLC27A4Q6P1M0 643 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 Q6ZS52 159 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 AIG1Q9NVV5 245 aa10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 RGPD3A6NKT7 1758 aaPredicted RBP10.1□□□□□ -0.79
SYNPO2-201ENST00000307142 FCER2P06734 321 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 ATXN1LP0C7T5 689 aaKnown RBP10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 IGFBP6P24592 240 aaPredicted RBP10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 SOX2P48431 317 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 KIAA1024LP59773 190 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 DSG2Q14126 1118 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 ZNF423Q2M1K9 1284 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 KHDC1Q4VXA5 237 aaKnown RBP10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 RNF175Q8N4F7 328 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 ZNF548Q8NEK5 533 aaPredicted RBP10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 HOXB13Q92826 284 aaPredicted RBP10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 EURLQ9NYK6 297 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 CLEC4EQ9ULY5 219 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 SLC7A7Q9UM01 511 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 LOC100509620A0A075B734 347 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 GXYLT2A0PJZ3 443 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 SDHDO14521 159 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 HIST1H1TP22492 207 aaPredicted RBP10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 HTR3AP46098 478 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 RAB38P57729 211 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 HERV-K104P61576 105 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 PLCZ1Q86YW0 608 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 LAS2Q8IYD9 372 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 PROKR1Q8TCW9 393 aa10.09□□□□□ -0.79
SYNPO2-201ENST00000307142 ASB11Q8WXH4 323 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms