RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 TM9SF1O15321 606 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 ARRB2P32121 409 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 GPC1P35052 558 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 SERPINB4P48594 390 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 SF3B4Q15427 424 aaKnown RBP eCLIP24.12■■□□□ 1.459e-6■■■■□ 20
CDKN2A-201ENST00000304494 CEP85LQ5SZL2 805 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 LRIG3Q6UXM1 1119 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 ZNF551Q7Z340 670 aaPredicted RBP24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 EXOC3L1Q86VI1 746 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 CCDC71Q8IV32 467 aaPredicted RBP24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 FAM83FQ8NEG4 500 aaPredicted RBP24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 OR4N2Q8NGD1 307 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 CLHC1Q8NHS4 586 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 CIDECQ96AQ7 238 aaPredicted RBP24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 EFHD2Q96C19 240 aaPredicted RBP24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 TIMP4Q99727 224 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 CENPHQ9H3R5 247 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 Q9N2J8 555 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 KCNJ16Q9NPI9 418 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 ZDHHC2Q9UIJ5 367 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 MRTO4Q9UKD2 239 aaKnown RBP24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 WIF1Q9Y5W5 379 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 BIRC5O15392 142 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 PEX11AO75192 247 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 SNRPB2P08579 225 aaKnown RBP24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 PRF1P14222 555 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 HPCAL1P37235 193 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 RPL3P39023 403 aaKnown RBP24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 KIR3DL1P43629 444 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 MANFP55145 182 aaKnown RBP24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 DECR1Q16698 335 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 EIPR1Q53HC9 387 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 WIPI1Q5MNZ9 446 aaPredicted RBP24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 VASNQ6EMK4 673 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 GDF7Q7Z4P5 450 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 SPOCK3Q9BQ16 436 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 C3orf14Q9HBI5 128 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 ACSS1Q9NUB1 689 aaPredicted RBP24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 CBLCQ9ULV8 474 aa24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 PHF3Q92576 2039 aaKnown RBP24.11■■□□□ 1.45
CDKN2A-201ENST00000304494 ITPR2Q14571 2701 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 FAM90A27PA6NNH2 459 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 HSPA4LO95757 839 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 MYZAPP0CAP1 466 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 PRPS2P11908 318 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 FRKP42685 505 aaPredicted RBP24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 ZFP36L2P47974 494 aaKnown RBP24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 PSMD4P55036 377 aaKnown RBP24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 ZNF385BQ569K4 471 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 PLCZ1Q86YW0 608 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 WDSUB1Q8N9V3 476 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 RNF138Q8WVD3 245 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 PKNOX2Q96KN3 472 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 ZIM3Q96PE6 472 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 LMF2Q9BU23 707 aaKnown RBP24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 PRDM14Q9GZV8 571 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 SERHLQ9NQF3 203 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 SLC6A5Q9Y345 797 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 ACTL7BQ9Y614 415 aa24.1■■□□□ 1.45
CDKN2A-201ENST00000304494 SKAP2O75563 359 aaPredicted RBP24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 SNUPNO95149 360 aaKnown RBP24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 ZWINTO95229 277 aa24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 ACTL6AO96019 429 aa24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 SERPINE1P05121 402 aa24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 BMP7P18075 431 aa24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 VPS26BQ4G0F5 336 aa24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 RIPPLY2Q5TAB7 128 aa24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 OR14L1PQ8NHC6 308 aa24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 CEP70Q8NHQ1 597 aa24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 ABTB1Q969K4 478 aaPredicted RBP24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 ENKD1Q9H0I2 346 aa24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 NOTCH2Q04721 2471 aa24.09■■□□□ 1.45
CDKN2A-201ENST00000304494 ADGRG4Q8IZF6 3080 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 A0A0G2JNJ9 132 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 WDR91A4D1P6 747 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 NKX2-6A6NCS4 301 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 CYP4B1P13584 511 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 EVI2BP34910 448 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 GAB1Q13480 694 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 CHI3L2Q15782 390 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 ACSF3Q4G176 576 aaPredicted RBP24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 TNFAIP8L3Q5GJ75 292 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 C6orf136Q5SQH8 315 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 YRDCQ86U90 279 aaKnown RBP24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 FNDC5Q8NAU1 212 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 PGM2Q96G03 612 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 C3orf30Q96M34 536 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 UGT2B28Q9BY64 529 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 UCK2Q9BZX2 261 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 OR2B2Q9GZK3 357 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 Q9UFV3 132 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 GIMAP2Q9UG22 337 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 ATP6V1HQ9UI12 483 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 ABCG2Q9UNQ0 655 aa24.08■■□□□ 1.45
CDKN2A-201ENST00000304494 SCAMP2O15127 329 aaKnown RBP24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 LYPLA1O75608 230 aaPredicted RBP24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 TOXO94900 526 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 EPPINO95925 133 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 GRK2P25098 689 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 WDR53Q7Z5U6 358 aaPredicted RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms