RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 C3orf38Q5JPI3 329 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 ENTPD8Q5MY95 495 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 SNAP47Q5SQN1 464 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 NRMQ8IXM6 262 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 C7orf57Q8NEG2 295 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 WFIKKN2Q8TEU8 576 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 B3GAT2Q9NPZ5 323 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 CAMK1Q14012 370 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 TMEM52BQ4KMG9 183 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 MARCH9Q86YJ5 346 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 OR4N5Q8IXE1 308 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 ENKURQ8TC29 256 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 TMEM255BQ8WV15 326 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC7A6Q92536 515 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC38A1Q9H2H9 487 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 SOCS6O14544 535 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 EIF2S1P05198 315 aaKnown RBP22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 ACADMP11310 421 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 IL18Q14116 193 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC35F1Q5T1Q4 408 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 QSOX2Q6ZRP7 698 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 ASCC1Q8N9N2 400 aaKnown RBP22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 BBS10Q8TAM1 723 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 MS4A6EQ96DS6 147 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 SENP5Q96HI0 755 aaPredicted RBP22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 CAMK1GQ96NX5 476 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 MED20Q9H944 212 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 PRSS16Q9NQE7 514 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 NPAP1Q9NZP6 1156 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC27A6Q9Y2P4 619 aa22.87■■□□□ 1.25
SPTSSA-201ENST00000298130 RGS13O14921 159 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 HYAL3O43820 417 aaPredicted RBP22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 HIST1H1TP22492 207 aaPredicted RBP22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 DDOSTP39656 456 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC1A3P43003 542 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 STXBP1P61764 594 aaKnown RBP22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 RAB40BQ12829 278 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 ARHGAP19Q14CB8 494 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 CLDN22Q8N7P3 220 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 SPPL3Q8TCT6 385 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 MCOLN1Q9GZU1 580 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC6A20Q9NP91 592 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 ASB4Q9Y574 426 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 NUP210Q8TEM1 1887 aaPredicted RBP22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 HMX3A6NHT5 357 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 SMLR1H3BR10 107 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 THY1P04216 161 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 RPN2P04844 631 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 PDX1P52945 283 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 RPA4Q13156 261 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 ASAH1Q13510 395 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 SMARCD3Q6STE5 483 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 HSDL2Q6YN16 418 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 KLBQ86Z14 1044 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 Q8N402 240 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 NUP43Q8NFH3 380 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 SMAP2Q8WU79 429 aaPredicted RBP22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 SPRYD4Q8WW59 207 aaPredicted RBP22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 ZNF707Q96C28 371 aaPredicted RBP22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 FAIM2Q9BWQ8 316 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 CFHR5Q9BXR6 569 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 ISG20L2Q9H9L3 353 aaKnown RBP22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 MRPS30Q9NP92 439 aaKnown RBP22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 PRDM7Q9NQW5 492 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 NLKQ9UBE8 527 aa22.86■■□□□ 1.25
SPTSSA-201ENST00000298130 CENPVL1A0A0U1RR11 272 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 ANKRD34BA5PLL1 514 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC2A2P11168 524 aaPredicted RBP22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 CTBP2P56545 445 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 FAM78AQ5JUQ0 283 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 LILRB4Q8NHJ6 448 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 FRMD6Q96NE9 622 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 GFM1Q96RP9 751 aaKnown RBP22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 ARHGAP9Q9BRR9 750 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 RNF121Q9H920 327 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 ENTPD4Q9Y227 616 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 KIF26AQ9ULI4 1882 aaPredicted RBP22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 TRBV23OR9-2A0A075B6M9 112 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 GSAPA4D1B5 854 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 CCNYL3P0C7X3 344 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 SDHBP21912 280 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 DRD3P35462 400 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 VEGFBP49765 207 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 TGM3Q08188 693 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 ZNF628Q5EBL2 1059 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 IL20RBQ6UXL0 311 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 CD300LDQ6UXZ3 194 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 VWA5B2Q8N398 1253 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 KCT2Q8NC54 265 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC38A2Q96QD8 506 aa22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 SECISBP2Q96T21 854 aaKnown RBP22.85■■□□□ 1.25
SPTSSA-201ENST00000298130 TPBGQ13641 420 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 CDK10Q15131 360 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 CCNJQ5T5M9 372 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 NATD1Q8N6N6 113 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC16A11Q8NCK7 471 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 TAS2R7Q9NYW3 318 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 CDC42EP2O14613 210 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 CLEC3AO75596 197 aa22.84■■□□□ 1.25
SPTSSA-201ENST00000298130 FGF19O95750 216 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms