RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 CNOT2Q9NZN8 540 aaKnown RBP13.08□□□□□ -0.31
NXF1-201ENST00000294172 NTMQ9P121 344 aa13.08□□□□□ -0.31
NXF1-201ENST00000294172 PTGFRNQ9P2B2 879 aa13.08□□□□□ -0.31
NXF1-201ENST00000294172 AP3D1O14617 1153 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 PRKYO43930 277 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 AGR2O95994 175 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 ACP2P11117 423 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 CHRNB1P11230 501 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 ST6GAL1P15907 406 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 SOX18P35713 384 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 SERPINB10P48595 397 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 ALDH6A1Q02252 535 aaKnown RBP13.08□□□□□ -0.32
NXF1-201ENST00000294172 ATP1A4Q13733 1029 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 IRF3Q14653 427 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 TYW3Q6IPR3 259 aaKnown RBP13.08□□□□□ -0.32
NXF1-201ENST00000294172 PRICKLE2Q7Z3G6 844 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 SLC46A3Q7Z3Q1 461 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 ZNF554Q86TJ5 538 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 LSRQ86X29 649 aaPredicted RBP13.08□□□□□ -0.32
NXF1-201ENST00000294172 CRELD1Q96HD1 420 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 COX4I2Q96KJ9 171 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 LRRC61Q9BV99 259 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 TTYH1Q9H313 450 aaPredicted RBP13.08□□□□□ -0.32
NXF1-201ENST00000294172 EGLN3Q9H6Z9 239 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 MTHFD2LQ9H903 347 aaPredicted RBP13.08□□□□□ -0.32
NXF1-201ENST00000294172 LMAN1LQ9HAT1 526 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 IL21RQ9HBE5 538 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 CAPN10Q9HC96 672 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 CNIH4Q9P003 139 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 CA14Q9ULX7 337 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 ZNF232Q9UNY5 417 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 ZNF443Q9Y2A4 671 aaPredicted RBP13.08□□□□□ -0.32
NXF1-201ENST00000294172 KLK4Q9Y5K2 254 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 PMF1-BGLAPU3KQ54 211 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 LAMA1P25391 3075 aa13.08□□□□□ -0.32
NXF1-201ENST00000294172 FAM170BA6NMN3 283 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 CYR61O00622 381 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 MBTPS2O43462 519 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 GALR3O60755 368 aaPredicted RBP13.07□□□□□ -0.32
NXF1-201ENST00000294172 ZNF12P17014 697 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 IFNA8P32881 189 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 GIPRP48546 466 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 PPM1FP49593 454 aaPredicted RBP13.07□□□□□ -0.32
NXF1-201ENST00000294172 BLKP51451 505 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 PSMD7P51665 324 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 MAZP56270 477 aaKnown RBP13.07□□□□□ -0.32
NXF1-201ENST00000294172 RELAQ04206 551 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 ST3GAL3Q11203 375 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 ITGADQ13349 1161 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 TRAM2Q15035 370 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 NDUFA9Q16795 377 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 SOWAHCQ53LP3 525 aaPredicted RBP13.07□□□□□ -0.32
NXF1-201ENST00000294172 ENTPD8Q5MY95 495 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 ACSM5Q6NUN0 579 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 CD300LDQ6UXZ3 194 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 PLEKHM3Q6ZWE6 761 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 SYT13Q7L8C5 426 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 PEX5LQ8IYB4 626 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 C9orf43Q8TAL5 461 aaPredicted RBP13.07□□□□□ -0.32
NXF1-201ENST00000294172 PIK3R3Q92569 461 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 FAM46AQ96IP4 442 aaKnown RBP13.07□□□□□ -0.32
NXF1-201ENST00000294172 CDCA4Q9BXL8 241 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 PLA2G12AQ9BZM1 189 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 DCSTAMPQ9H295 470 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 SLC25A19Q9HC21 320 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 TBCCD1Q9NVR7 557 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 IRAK4Q9NWZ3 460 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 NDOR1Q9UHB4 597 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 IFT52Q9Y366 437 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 CENPVL1A0A0U1RR11 272 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 RDH16O75452 317 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 GPR75O95800 540 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 PTNP21246 168 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 CDH3P22223 829 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 GRK5P34947 590 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 IDUAP35475 653 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 SLC15A1P46059 708 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 PCYT1AP49585 367 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 RGS6P49758 472 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 MAP4K2Q12851 820 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 EXOSC7Q15024 291 aaKnown RBP13.07□□□□□ -0.32
NXF1-201ENST00000294172 CCDC85BQ15834 202 aaPredicted RBP13.07□□□□□ -0.32
NXF1-201ENST00000294172 ARHGAP11BQ3KRB8 267 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 ZNF367Q7RTV3 350 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 SLC34A3Q8N130 599 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 CA13Q8N1Q1 262 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 OR9A4Q8NGU2 314 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 DIO2Q92813 273 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 SDF2Q99470 211 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 MCHR1Q99705 422 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 RBCK1Q9BYM8 510 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 OR51E2Q9H255 320 aa13.07□□□□□ -0.32
NXF1-201ENST00000294172 C19orf53Q9UNZ5 99 aaPredicted RBP13.07□□□□□ -0.32
NXF1-201ENST00000294172 RPLP0P05388 317 aaKnown RBP13.06□□□□□ -0.32
NXF1-201ENST00000294172 OCM2P0CE71 109 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 OCMP0CE72 109 aaPredicted RBP13.06□□□□□ -0.32
NXF1-201ENST00000294172 SPTBP11277 2137 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 SRFP11831 508 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms