RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 MYO10Q9HD67 2058 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 LOC285556D6RIA3 1793 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 A0A1W2PPK0 400 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 B4GALT3O60512 393 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 TFP02787 698 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 EBLN1P0CF75 366 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 BCKDHAP12694 445 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 GPX3P22352 226 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 POLR2IP36954 125 aaKnown RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 GNALP38405 381 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 RGS6P49758 472 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 S100A10P60903 97 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 GTDC1Q4AE62 458 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 ATCAYQ86WG3 371 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 LINC00471Q8N535 108 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 SECISBP2Q96T21 854 aaKnown RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 NEURL2Q9BR09 285 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 GRXCR2A6NFK2 248 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 EIF3FO00303 357 aaPredicted RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 ACOT8O14734 319 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 NDUFS4O43181 175 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 TXNL1O43396 289 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 SEC14L2O76054 403 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 RPP14O95059 124 aaKnown RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 MT-ND5P03915 603 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 PIK3CBP42338 1070 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 OR3A2P47893 321 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 ZNF155Q12901 538 aaPredicted RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 DEFB133Q30KQ1 61 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 OR4K1Q8NGD4 311 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 NETO1Q8TDF5 533 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 SLC5A11Q8WWX8 675 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 CIDECQ96AQ7 238 aaPredicted RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 TESCQ96BS2 214 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 ACTR10Q9NZ32 417 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 KCNN3Q9UGI6 736 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 CORINQ9Y5Q5 1042 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 PSME4Q14997 1843 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 NUDT7P0C024 238 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 ETV1P50549 477 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 EPHA5P54756 1037 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 NRG3P56975 720 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 PRR5P85299 388 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 FAPQ12884 760 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 KEAP1Q14145 624 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 AGTRAPQ6RW13 159 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 CEACAM19Q7Z692 300 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 THOC6Q86W42 341 aaKnown RBP10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 OR8S1Q8NH09 359 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 LRR1Q96L50 414 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 RGCCQ9H4X1 137 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 GAREM1Q9H706 876 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 ENTPD2Q9Y5L3 495 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 SMCHD1A6NHR9 2005 aa10.77□□□□□ -0.68
NPC1L1-201ENST00000289547 NPIPB15A6NHN6 443 aaPredicted RBP10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 CLDN24A6NM45 220 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 CD63P08962 238 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 ACVR2AP27037 513 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 SOX3P41225 446 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 CCR2P41597 374 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 CDK3Q00526 305 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 SF3A2Q15428 464 aaKnown RBP10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 MTFR2Q6P444 385 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 SYT13Q7L8C5 426 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 RHEBL1Q8TAI7 183 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 TEX10Q9NXF1 929 aaPredicted RBP10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 NENFQ9UMX5 172 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 PCDHGB7Q9Y5F8 929 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 ZCWPW2A0A1B0GU75 182 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 POM121CA8CG34 1229 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 SLC25A12O75746 678 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 ALPPP05187 535 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 TPMTP51580 245 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 CLDN2P57739 230 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 SLC35F1Q5T1Q4 408 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 B3GNT8Q7Z7M8 397 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 TMC8Q8IU68 726 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 BEST3Q8N1M1 668 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 NATD1Q8N6N6 113 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 BOLLQ8N9W6 283 aaKnown RBP10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 ZNF707Q96C28 371 aaPredicted RBP10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 CPNE2Q96FN4 548 aaPredicted RBP10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 TM9SF2Q99805 663 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 TTTY10Q9BZA0 68 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 FARSAQ9Y285 508 aaKnown RBP10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 MCIDASD6RGH6 385 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 RBBP9O75884 186 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 ALPLP05186 524 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 PGAM2P15259 253 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 CSNK1EP49674 416 aaKnown RBP10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 ARF3P61204 181 aaPredicted RBP10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 ARF1P84077 181 aaKnown RBP10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 EID2Q8N6I1 236 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 OR52B6Q8NGF0 335 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 NT5C3BQ969T7 300 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 COQ8BQ96D53 544 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 CDC6Q99741 560 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 PIP5K1AQ99755 562 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms