RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TMEM107Q6UX40 140 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 LRRC69Q6ZNQ3 347 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 CFAP77Q6ZQR2 320 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 CBLL1Q75N03 491 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 PRSS58Q8IYP2 241 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 OR8J1Q8NGP2 316 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 CAMK1GQ96NX5 476 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 UHRF1Q96T88 793 aaPredicted RBP11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 NEUROD4Q9HD90 331 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 CXXC1Q9P0U4 656 aaPredicted RBP11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 CORINQ9Y5Q5 1042 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 A0A1W2PP55 124 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 TNFRSF10AO00220 468 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 IGLV3-27P01718 113 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 TIMP2P16035 220 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 FADDQ13158 208 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 FGL2Q14314 439 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 LIPIQ6XZB0 460 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 TRIM46Q7Z4K8 759 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 KLBQ86Z14 1044 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 BEST3Q8N1M1 668 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 ZNF689Q96CS4 500 aaPredicted RBP11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 FBXL12Q9NXK8 326 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 HIF3AQ9Y2N7 669 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 ENPP4Q9Y6X5 453 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 GRXCR2A6NFK2 248 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 C2orf74A8MZ97 194 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 PDGFRLQ15198 375 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 CNIH2Q6PI25 160 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 CYHR1Q6ZMK1 362 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 OR2A12Q8NGT7 310 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 DNAJA3Q96EY1 480 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 PLEKHA1Q9HB21 404 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 GNG8Q9UK08 70 aa11.89□□□□□ -0.51
SLC6A1-201ENST00000287766 URADA6NGE7 173 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 GTF2F2P13984 249 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 DDCP20711 480 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 S100GP29377 79 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 SLAMF1Q13291 335 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 SEC23BQ15437 767 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 ADPRMQ3LIE5 342 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 ZNF852Q6ZMS4 543 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 FCAMRQ8WWV6 532 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 MROQ9BYG7 248 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 PCBD2Q9H0N5 130 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 STUB1Q9UNE7 303 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 EDDM13A0A1B0GTR0 161 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 AGPAT2O15120 278 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 SLC19A2O60779 497 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 F11P03951 625 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 HSD3B1P14060 373 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 HSD3B2P26439 372 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 GDI1P31150 447 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 DBPQ10586 325 aaPredicted RBP11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 MICAQ29983 383 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 FAM205BPQ63HN1 556 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 ERN2Q76MJ5 926 aaKnown RBP11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 PARS2Q7L3T8 475 aaKnown RBP11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 ESX1Q8N693 406 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 TESCQ96BS2 214 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 TEX10Q9NXF1 929 aaPredicted RBP11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 OR52A4PA6NMU1 304 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 RHCEP18577 417 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 HOXD11P31277 338 aaPredicted RBP11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 PIK3CBP42338 1070 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 PRMT2P55345 433 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 ISL1P61371 349 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 ERVK-21P61565 698 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 RACK1P63244 317 aaKnown RBP11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 DNAJC5GQ8N7S2 189 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 OR4K5Q8NGD3 323 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 WFIKKN2Q8TEU8 576 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 MUL1Q969V5 352 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 EIF5A2Q9GZV4 153 aaKnown RBP11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 CENPMQ9NSP4 180 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 CALML5Q9NZT1 146 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 SCP2D1Q9UJQ7 156 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 PCDHGA6Q9Y5G7 932 aa11.88□□□□□ -0.51
SLC6A1-201ENST00000287766 CARNS1A5YM72 827 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 TVP23AA6NH52 213 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 GPR37L1O60883 481 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 LATS1O95835 1130 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 MT-ND5P03915 603 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 PDGFAP04085 211 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 CST5P28325 142 aaPredicted RBP11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 IMPA1P29218 277 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 RORAP35398 523 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 GRK6P43250 576 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 CSNK1DP48730 415 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 VSX2P58304 361 aaPredicted RBP11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 FAM26DQ5JW98 314 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 ZNF101Q8IZC7 436 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 DPH7Q9BTV6 452 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 RNF167Q9H6Y7 350 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 C14orf105Q9NVL8 296 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 MED16Q9Y2X0 877 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 COLEC10Q9Y6Z7 277 aa11.87□□□□□ -0.51
SLC6A1-201ENST00000287766 PTPRFP10586 1907 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms