RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 CEBPEQ15744 281 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 PRPF38BQ5VTL8 546 aaKnown RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 DEPDC4Q8N2C3 294 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 B3GNT7Q8NFL0 401 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 RAB2BQ8WUD1 216 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 ZFPM2Q8WW38 1151 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 A8MU76 341 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 ADAP00813 363 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 OSMP13725 252 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 PGDP52209 483 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 SH3BGRP55822 239 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 CXCR4P61073 352 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 BTG2P78543 158 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 DBPQ10586 325 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 PUS10Q3MIT2 529 aaKnown RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 PRAMEF17Q5VTA0 474 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 ZNF730Q6ZMV8 503 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 SLC16A12Q6ZSM3 486 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 PLEKHM3Q6ZWE6 761 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 Q8N9G6 341 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 TRNT1Q96Q11 434 aaKnown RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 PINK1Q9BXM7 581 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 EGLN3Q9H6Z9 239 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 REV1Q9UBZ9 1251 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 FTSJ1Q9UET6 329 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 PI4KAP42356 2102 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 GXYLT2A0PJZ3 443 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 NME1P15531 152 aaKnown RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 ST13P50502 369 aaKnown RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 NCS1P62166 190 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 ZNF155Q12901 538 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 MAPK14Q16539 360 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 CASP12Q6UXS9 341 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 GKN2Q86XP6 184 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 NKAIN4Q8IVV8 208 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 OR2L13Q8N349 312 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 MMABQ96EY8 250 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 FAM46AQ96IP4 442 aaKnown RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 MCHR1Q99705 422 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 DSN1Q9H410 356 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 CACYBPQ9HB71 228 aaKnown RBP16.75■□□□□ 0.27
CAPN1-201ENST00000279247 GPR27Q9NS67 375 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 PSORS1C1Q9UIG5 152 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 A0A087WUU8 490 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 IGHV5-51A0A0C4DH38 117 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 DUXAA6NLW8 204 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 CLCA1A8K7I4 914 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 AQP9O43315 295 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 ENTPD6O75354 484 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 CH25HO95992 272 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 TMBIM6P55061 237 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 STX4Q12846 297 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 INAVAQ3KP66 663 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 ZNF628Q5EBL2 1059 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 PRSS48Q7RTY5 328 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 FKBP10Q96AY3 582 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 PRRC1Q96M27 445 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 CNPPD1Q9BV87 410 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 KLHL28Q9NXS3 571 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 MGAT4BQ9UQ53 548 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 LIPT1Q9Y234 373 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 ASCC3Q8N3C0 2202 aaKnown RBP16.74■□□□□ 0.27
CAPN1-201ENST00000279247 A0A1W2PR77 199 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 FAM221BA6H8Z2 402 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 ZAR1LA6NP61 321 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 KPNA4O00629 521 aaPredicted RBP16.74■□□□□ 0.27
CAPN1-201ENST00000279247 PRG2P13727 222 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 ALAS2P22557 587 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 MLLT3P42568 568 aaPredicted RBP16.74■□□□□ 0.27
CAPN1-201ENST00000279247 GPR4P46093 362 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 RACK1P63244 317 aaKnown RBP16.74■□□□□ 0.27
CAPN1-201ENST00000279247 TUBA3CQ13748 450 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 GALNT12Q8IXK2 581 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 PEX5LQ8IYB4 626 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 OR52R1Q8NGF1 315 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 NDNFQ8TB73 568 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 MIPOL1Q8TD10 442 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 SDF2Q99470 211 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 CCNB1IP1Q9NPC3 277 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 NDOR1Q9UHB4 597 aa16.74■□□□□ 0.27
CAPN1-201ENST00000279247 AP3D1O14617 1153 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 TLX2O43763 284 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-201ENST00000279247 ALOX5P09917 674 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 CD36P16671 472 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 MAOAP21397 527 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 SSTR4P31391 388 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 ENTPD8Q5MY95 495 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 MFSD4BQ5TF39 518 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 TYW3Q6IPR3 259 aaKnown RBP16.73■□□□□ 0.27
CAPN1-201ENST00000279247 ZAR1Q86SH2 424 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 SVOPQ8N4V2 548 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 OR4N2Q8NGD1 307 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 DOK1Q99704 481 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 PLA2G12AQ9BZM1 189 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 LYRM4Q9HD34 91 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 MAT2BQ9NZL9 334 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 GPR52Q9Y2T5 361 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 RHPN2P1A8MT19 583 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 C10orf142B7Z368 130 aa16.73■□□□□ 0.27
CAPN1-201ENST00000279247 CYP7B1O75881 506 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms