RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 CIB4A0PJX0 185 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 SH3PXD2BA1X283 911 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 A8MVJ9 347 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 BCAT2O15382 392 aaPredicted RBP10.65□□□□□ -0.7
USP6NL-201ENST00000277575 CSNK1EP49674 416 aaKnown RBP10.65□□□□□ -0.7
USP6NL-201ENST00000277575 RAB2AP61019 212 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 TUBB3Q13509 450 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 ABHD17BQ5VST6 288 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 ZNF613Q6PF04 617 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 CCDC36Q8IYA8 594 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 HS3ST5Q8IZT8 346 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 NLGN4XQ8N0W4 816 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 DENND6BQ8NEG7 585 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 NXPE3Q969Y0 559 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 ASB16Q96NS5 453 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 DUSP23Q9BVJ7 150 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 CLMPQ9H6B4 373 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 ZNF304Q9HCX3 659 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 HPF1Q9NWY4 346 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 OBP2AQ9NY56 170 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 GPR83Q9NYM4 423 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 ATXN7L1Q9ULK2 861 aaPredicted RBP10.65□□□□□ -0.7
USP6NL-201ENST00000277575 BAIAP2Q9UQB8 552 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 PLEKHA6Q9Y2H5 1048 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 H0YIV9 168 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 H3BNC9 293 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 GRPRP30550 384 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 SELENOVP59797 346 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 POU4F2Q12837 409 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 SLC5A12Q1EHB4 618 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 MICAQ29983 383 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 PRAMEF17Q5VTA0 474 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 SBSNQ6UWP8 590 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 PRR22Q8IZ63 422 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 IQCF1Q8N6M8 205 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 GATAD2BQ8WXI9 593 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 LINC01599Q8WXQ3 324 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 PAK1IP1Q9NWT1 392 aaPredicted RBP10.65□□□□□ -0.7
USP6NL-201ENST00000277575 PHIPQ8WWQ0 1821 aa10.65□□□□□ -0.7
USP6NL-201ENST00000277575 APC2O95996 2303 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 CASC3O15234 703 aaKnown RBP10.65□□□□□ -0.71
USP6NL-201ENST00000277575 HSPA12AO43301 675 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 NDUFB2O95178 105 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 GPR75O95800 540 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 ENTPD1P49961 510 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 CTBP2P56545 445 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 HBA1P69905 142 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 GALK2Q01415 458 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 TMED4Q7Z7H5 227 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 LSMEM2Q8N112 164 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 ZFP41Q8N8Y5 198 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 OR2L8Q8NGY9 312 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 SAMD8Q96LT4 415 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 SCGB3A2Q96PL1 93 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 ZNF696Q9H7X3 374 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 CNIH4Q9P003 139 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 EXTL2Q9UBQ6 330 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 CMAHPQ9Y471 501 aa10.65□□□□□ -0.71
USP6NL-201ENST00000277575 SH3D21A4FU49 640 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 H0YGG7 62 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 MYF6P23409 242 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 GNG2P59768 71 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 ARF3P61204 181 aaPredicted RBP10.64□□□□□ -0.71
USP6NL-201ENST00000277575 TMEM236Q5W0B7 351 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 THOC7Q6I9Y2 204 aaKnown RBP10.64□□□□□ -0.71
USP6NL-201ENST00000277575 C22orf42Q6IC83 251 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 SLC22A16Q86VW1 577 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 ZNF740Q8NDX6 193 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 OR51L1Q8NGJ5 315 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 OR9A4Q8NGU2 314 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 WDR20Q8TBZ3 569 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 CNN2Q99439 309 aaKnown RBP10.64□□□□□ -0.71
USP6NL-201ENST00000277575 PINK1Q9BXM7 581 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 HDAC8Q9BY41 377 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 DPH1Q9BZG8 443 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 MEMO1Q9Y316 297 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 PCDHA9Q9Y5H5 950 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 TPRP12270 2363 aaKnown RBP10.64□□□□□ -0.71
USP6NL-201ENST00000277575 NUP205Q92621 2012 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 TOGARAM1Q9Y4F4 1720 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 SPTA1P02549 2419 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 NPIPA5A0A0B4J1W7 369 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 NPIPA7E9PJI5 369 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 GABBR2O75899 941 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 SLITRK5O94991 958 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 NPIPA8P0DM63 369 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 DPP6P42658 865 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 MFSD13AQ14CX5 517 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 TRAM1Q15629 374 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 METTL4Q8N3J2 472 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 CITED4Q96RK1 184 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 SLAMF8Q9P0V8 285 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 HOXC11O43248 304 aaPredicted RBP10.64□□□□□ -0.71
USP6NL-201ENST00000277575 SRPX2O60687 465 aaPredicted RBP10.64□□□□□ -0.71
USP6NL-201ENST00000277575 PABPC4LP0CB38 370 aaKnown RBP10.64□□□□□ -0.71
USP6NL-201ENST00000277575 LHCGRP22888 699 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 ACTA2P62736 377 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 ACTG2P63267 376 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 SLCO4C1Q6ZQN7 724 aa10.64□□□□□ -0.71
USP6NL-201ENST00000277575 TMPPEQ6ZT21 453 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms