RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 C2CD4AQ8NCU7 369 aaPredicted RBP19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 SLC41A3Q96GZ6 507 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 GPN2Q9H9Y4 310 aaPredicted RBP19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 SQORQ9Y6N5 450 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 IGFBP1P08833 259 aaPredicted RBP19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 DDCP20711 480 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 CDKN2DP55273 166 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 RRAS2P62070 204 aaPredicted RBP19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 AARDQ4LEZ3 155 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 SFRP5Q5T4F7 317 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 C15orf40Q8WUR7 153 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 LCHNA4D1U4 455 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 DFNA5O60443 496 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 DOC2AQ14183 400 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 GPR149Q86SP6 731 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 MUCL1Q96DR8 90 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 ASB9Q96DX5 294 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 SLC25A18Q9H1K4 315 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 TIA1P31483 386 aaKnown RBP eCLIP19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 NECTIN4Q96NY8 510 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 PDCD1LG2Q9BQ51 273 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 PRAMEF2O60811 474 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 STC2O76061 302 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 APBB3O95704 486 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 CD34P28906 385 aa19.29■□□□□ 0.68
CACNA1B-201ENST00000277549 H7C1Q1 480 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 M0R233 179 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 TIMP1P01033 207 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 FPR1P21462 350 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 TP53I3Q53FA7 332 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 IRF2BP1Q8IU81 584 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 FAM160A2Q8N612 972 aaPredicted RBP19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 SDR9C7Q8NEX9 313 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 KIAA1191Q96A73 305 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 VRK1Q99986 396 aaPredicted RBP19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 SLC19A2O60779 497 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 HNRNPA1P09651 372 aaKnown RBP eCLIP19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 GNB1P62873 340 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 KCNJ11Q14654 390 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 EXOSC7Q15024 291 aaKnown RBP19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 AKR1C8PQ5T2L2 129 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 MPP7Q5T2T1 576 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 BEST3Q8N1M1 668 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 TXNDC15Q96J42 360 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 FCRL3Q96P31 734 aaPredicted RBP19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 NELL2Q99435 816 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 CEBPZOSA8MTT3 80 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 DCAF12L1Q5VU92 463 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 OR2A12Q8NGT7 310 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 ZNF689Q96CS4 500 aaPredicted RBP19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 RETREG1Q9H6L5 497 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 USP32Q8NFA0 1604 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 DLGAP1O14490 977 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 RPS2P15880 293 aaKnown RBP19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 MELKQ14680 651 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 TPRA1Q86W33 373 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 HS3ST5Q8IZT8 346 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 CYB561A3Q8NBI2 242 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 GRPEL2Q8TAA5 225 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 LRIT1Q9P2V4 623 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 POLHQ9Y253 713 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 Q9Y3F1 56 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 NSG1A0A0A6YYJ2 146 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 LRRTM2O43300 516 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 ETFAP13804 333 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 TAS2R38P59533 333 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 SLC25A11Q02978 314 aaKnown RBP19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 LRRC57Q8N9N7 239 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 SNX18Q96RF0 628 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 AGPAT2O15120 278 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 FRS3O43559 492 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 BMP4P12644 408 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 PSMB10P40306 273 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 OR1D4P47884 311 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 GNB2P62879 340 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 ELAVL3Q14576 367 aaKnown RBP19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 GSG1LQ6UXU4 331 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 APOOQ9BUR5 198 aa19.28■□□□□ 0.68
CACNA1B-201ENST00000277549 ACY1Q03154 408 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 EMX2Q04743 252 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 PLEKHN1Q494U1 663 aaPredicted RBP19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 TECPR1Q7Z6L1 1165 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 SLC35F2Q8IXU6 374 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 STT3BQ8TCJ2 826 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 GTF2H4Q92759 462 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 SLAMF9Q96A28 289 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 PCDH17O14917 1159 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 PITX1P78337 314 aaPredicted RBP19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 OR52E8Q6IFG1 317 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 HEPHL1Q6MZM0 1159 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 ANKMY1Q9P2S6 941 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 OR5D16Q8NGK9 328 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 SIX2Q9NPC8 291 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 B4GAT1O43505 415 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 IL1AP01583 271 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 NADK2Q4G0N4 442 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 ZNF551Q7Z340 670 aaPredicted RBP19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 TMEM110Q86TL2 294 aa19.27■□□□□ 0.68
CACNA1B-201ENST00000277549 NRMQ8IXM6 262 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms