RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TMEM229AB2RXF0 380 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 SGK494L7N484 410 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 HMGN4O00479 90 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 SOCS2O14508 198 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 RASAL1O95294 804 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 CST1P01037 141 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 IFNA14P01570 189 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 IGHEP01854 428 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 TFPTP0C1Z6 253 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 FBLP22087 321 aaKnown RBP22.88■■□□□ 1.25
SSBP4-201ENST00000270061 ANXA11P50995 505 aaKnown RBP22.88■■□□□ 1.25
SSBP4-201ENST00000270061 FOLH1Q04609 750 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 TNFAIP8L2Q6P589 184 aaPredicted RBP22.88■■□□□ 1.25
SSBP4-201ENST00000270061 SHISA6Q6ZSJ9 500 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 PIWIL3Q7Z3Z3 882 aaKnown RBP22.88■■□□□ 1.25
SSBP4-201ENST00000270061 GALNT10Q86SR1 603 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 PATL1Q86TB9 770 aaKnown RBP22.88■■□□□ 1.25
SSBP4-201ENST00000270061 OR5T3Q8NGG3 340 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 OR9A2Q8NGT5 310 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 OR9A4Q8NGU2 314 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 DOHHQ9BU89 302 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 SERHL2Q9H4I8 314 aa22.88■■□□□ 1.25
SSBP4-201ENST00000270061 VSTM2BA6NLU5 285 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 PLOD2O00469 737 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 DENRO43583 198 aaKnown RBP22.87■■□□□ 1.25
SSBP4-201ENST00000270061 FOXS1O43638 330 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 CEACAM4O75871 244 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 NSA2O95478 260 aaKnown RBP22.87■■□□□ 1.25
SSBP4-201ENST00000270061 MATN1P21941 496 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 MMP11P24347 488 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 PGDP52209 483 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 RPS26P62854 115 aaKnown RBP22.87■■□□□ 1.25
SSBP4-201ENST00000270061 NRF1Q16656 503 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 DCAF10Q5QP82 559 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 TMEM107Q6UX40 140 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 ZDHHC21Q8IVQ6 265 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 CBR4Q8N4T8 237 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 CLEC1AQ8NC01 280 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 SLC38A5Q8WUX1 472 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 VPS50Q96JG6 964 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 HSH2DQ96JZ2 352 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 Q9H521 79 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 CNTRLQ7Z7A1 2325 aa22.87■■□□□ 1.25
SSBP4-201ENST00000270061 C7orf72A4D263 438 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 A6NL46 340 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 RDH16O75452 317 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 GPR75O95800 540 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 PDGFAP04085 211 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 IFI6P09912 130 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 CPMP14384 443 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 PORP16435 677 aaPredicted RBP22.86■■□□□ 1.25
SSBP4-201ENST00000270061 KHKP50053 298 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 KLRB1Q12918 225 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 DSG2Q14126 1118 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 TEX19Q8NA77 164 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 FDCSPQ8NFU4 85 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 STT3BQ8TCJ2 826 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 ADAMTS18Q8TE60 1221 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 MMABQ96EY8 250 aaPredicted RBP22.86■■□□□ 1.25
SSBP4-201ENST00000270061 OR51I1Q9H343 314 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 BLACEA4D250 179 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 M0QX08 132 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 CHST10O43529 356 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 SLITRK5O94991 958 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 AQP1P29972 269 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 CLCN2P51788 898 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 KCNJ10P78508 379 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 VTCN1Q7Z7D3 282 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 OR10Q1Q8NGQ4 319 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 TMBIM1Q969X1 311 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 TAMM41Q96BW9 452 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 NR1H4Q96RI1 486 aaPredicted RBP22.86■■□□□ 1.25
SSBP4-201ENST00000270061 TRPC4Q9UBN4 977 aa22.86■■□□□ 1.25
SSBP4-201ENST00000270061 RP1L1Q8IWN7 2480 aaPredicted RBP22.85■■□□□ 1.25
SSBP4-201ENST00000270061 PDLIM1O00151 329 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 DPM1O60762 260 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 FABP3P05413 133 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 ZGLP1P0C6A0 271 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 MED21Q13503 144 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 MAPK11Q15759 364 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 TMEM52Q8NDY8 209 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 NUP43Q8NFH3 380 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 LZICQ8WZA0 190 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 CRB3Q9BUF7 120 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 YIPF2Q9BWQ6 316 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 OSBPL11Q9BXB4 747 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 GPR83Q9NYM4 423 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 P2RX2Q9UBL9 471 aa22.85■■□□□ 1.25
SSBP4-201ENST00000270061 IGLV3-12A0A075B6K2 115 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 A0A0A6YYC8 382 aaPredicted RBP22.84■■□□□ 1.25
SSBP4-201ENST00000270061 TMEM247A6NEH6 219 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 C5orf58C9J3I9 102 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 I3L1I5 382 aaPredicted RBP22.84■■□□□ 1.25
SSBP4-201ENST00000270061 ATP1B1P05026 303 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 HMGN2P05204 90 aaKnown RBP22.84■■□□□ 1.25
SSBP4-201ENST00000270061 ZNF23P17027 643 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 CASRP41180 1078 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 MC3RP41968 323 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 VWA2Q5GFL6 755 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 PRSS58Q8IYP2 241 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms