RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 AVL9Q8NBF6 648 aa13.32□□□□□ -0.28
TNFRSF11A-201ENST00000269485 BBS10Q8TAM1 723 aa13.32□□□□□ -0.28
TNFRSF11A-201ENST00000269485 RGMAQ96B86 450 aa13.32□□□□□ -0.28
TNFRSF11A-201ENST00000269485 OR51V1Q9H2C8 321 aa13.32□□□□□ -0.28
TNFRSF11A-201ENST00000269485 MMP27Q9H306 513 aa13.32□□□□□ -0.28
TNFRSF11A-201ENST00000269485 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
TNFRSF11A-201ENST00000269485 FAM240BA0A1B0GVZ2 78 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 RDH16O75452 317 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 AP2A2O94973 939 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 STSP08842 583 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TSPAN19P0C672 248 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 SLC35G6P0C7Q6 338 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 FUT1P19526 365 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 BCL6P41182 706 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 RAB28P51157 221 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 SNRPNP63162 240 aaKnown RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 GPR18Q14330 331 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 ANXA8L1Q5VT79 327 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 HSDL2Q6YN16 418 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 ACOT4Q8N9L9 421 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 KBTBD8Q8NFY9 601 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 MUL1Q969V5 352 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 CCL27Q9Y4X3 112 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 KCNE3Q9Y6H6 103 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 IGLV3-16A0A075B6K0 115 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 FAM183AA6NL82 134 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 H0YC42 278 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TLX2O43763 284 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 CMPK1P30085 196 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 SSTR2P30874 369 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 GPR4P46093 362 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 RGS8P57771 180 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 FGFBP1Q14512 234 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 PRSS53Q2L4Q9 553 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 SPIN4Q56A73 249 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 PDZD3Q86UT5 571 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TBC1D19Q8N5T2 526 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TCEANCQ8N8B7 351 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 DYNC2LI1Q8TCX1 351 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 METTL2AQ96IZ6 378 aaKnown RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 SLC6A18Q96N87 628 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 RBM4BQ9BQ04 359 aaKnown RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 RBM4Q9BWF3 364 aaKnown RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 ERVMER34-1Q9H9K5 563 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 CFIP05156 583 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 PRR35P0CG20 571 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 HPGDP15428 266 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 C5AR1P21730 350 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 ADARB1P78563 741 aaKnown RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 MLF2Q15773 248 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 FAM69BQ5VUD6 431 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TRIQKQ629K1 86 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TMPRSS11AQ6ZMR5 421 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 OR9A4Q8NGU2 314 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 OR51A7Q8NH64 312 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 LILRB1Q8NHL6 650 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 FBXW5Q969U6 566 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TMCO6Q96DC7 493 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 NARS2Q96I59 477 aaKnown RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 CPPED1Q9BRF8 314 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 SLIRPQ9GZT3 109 aaKnown RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 SERHLQ9NQF3 203 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 DIABLOQ9NR28 239 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 PNO1Q9NRX1 252 aaKnown RBP13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 SIRT5Q9NXA8 310 aa13.31□□□□□ -0.28
TNFRSF11A-201ENST00000269485 PSMD9O00233 223 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 LRRTM2O43300 516 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 SAGP10523 405 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 DHPSP49366 369 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 BNC1Q01954 994 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 MVKQ03426 396 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 IFI44LQ53G44 452 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TRIM46Q7Z4K8 759 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 VRK2Q86Y07 508 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TMIEQ8NEW7 156 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 WDR36Q8NI36 951 aaKnown RBP13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 FOXN4Q96NZ1 517 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 NECTIN3Q9NQS3 549 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 SNTG1Q9NSN8 517 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 WSB2Q9NYS7 404 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 BAIAP2Q9UQB8 552 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 PEX16Q9Y5Y5 336 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 FAM171A2A8MVW0 826 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 CCNDBP1O95273 360 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 OR1D4P47884 311 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 RPE65Q16518 533 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TIGD6Q17RP2 521 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 FRMPD2BQ6IN97 320 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 BHLHB9Q6PI77 547 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 CASP12Q6UXS9 341 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 ANGPTL6Q8NI99 470 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TESCQ96BS2 214 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 ZNF514Q96K75 400 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 C1QTNF3Q9BXJ4 246 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 NRSN2Q9GZP1 204 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 DCAF13Q9NV06 445 aaKnown RBP13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 CLEC1BQ9P126 229 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 APOBEC3BQ9UH17 382 aaKnown RBP13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 FAM220BPB1ANY3 271 aa13.3□□□□□ -0.28
TNFRSF11A-201ENST00000269485 TOXO94900 526 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms