RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 DUSP2Q05923 314 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 TRAM2Q15035 370 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 TMEM236Q5W0B7 351 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 OR6T1Q8NGN1 323 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 OR9Q1Q8NGQ5 310 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 EFHD2Q96C19 240 aaPredicted RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 TRNT1Q96Q11 434 aaKnown RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 SLC38A2Q96QD8 506 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 BARD1Q99728 777 aaKnown RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 PELOQ9BRX2 385 aaKnown RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 IER2Q9BTL4 223 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 ZBTB20Q9HC78 741 aaPredicted RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 NLGN3Q9NZ94 848 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 PILRAQ9UKJ1 303 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 PADI2Q9Y2J8 665 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 PCDHGA8Q9Y5G5 932 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 CSNK1G3Q9Y6M4 447 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 XIRP2A4UGR9 3374 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 DBIP07108 87 aaKnown RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 JMJD7P0C870 316 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 NR4A1P22736 598 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 MYF6P23409 242 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 RORAP35398 523 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 DAPP51397 102 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 EPHA4P54764 986 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 CCL7P80098 99 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 TXNL4AP83876 142 aaKnown RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 CD47Q08722 323 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 Q6ZPB1 254 aaPredicted RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 CHERPQ8IWX8 916 aaKnown RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 SVOPQ8N4V2 548 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 IFI44Q8TCB0 444 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 ADAMTS16Q8TE57 1224 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 ARSGQ96EG1 525 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 SARGQ9BW04 601 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 AICDAQ9GZX7 198 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 PIGUQ9H490 435 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 PCDHGB5Q9Y5G0 923 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 ALPK2Q86TB3 2170 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 SMIM31A0A1B0GVY4 71 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 CLDN24A6NM45 220 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 ACOX3O15254 700 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 GZMMP51124 257 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 NR0B1P51843 470 aaKnown RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 LSM3P62310 102 aaKnown RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 C6orf141Q5SZD1 244 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 ZG16BQ96DA0 208 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 SENP5Q96HI0 755 aaPredicted RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 ART5Q96L15 291 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 EPYCQ99645 322 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 G6PC3Q9BUM1 346 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 PINK1Q9BXM7 581 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 TBC1D23Q9NUY8 699 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 VNN3Q9NY84 501 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 C19orf53Q9UNZ5 99 aaPredicted RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 TRBV4-1A0A0J9YWV2 114 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 HRO43593 1189 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 RGS10O43665 173 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 AK1P00568 194 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 PAICSP22234 425 aaKnown RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 PIGAP37287 484 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 RPS6KA3P51812 740 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 SH3BGRP55822 239 aaPredicted RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 NRG3P56975 720 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 IRAK1BP1Q5VVH5 260 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 TMEM71Q6P5X7 295 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 APLFQ8IW19 511 aaPredicted RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 ZNF619Q8N2I2 560 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 ZNF527Q8NB42 609 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 DTWD2Q8NBA8 298 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 Q96MT0 163 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 CRB3Q9BUF7 120 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 OR10A5Q9H207 317 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 IL20RAQ9UHF4 553 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 MGAT4BQ9UQ53 548 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 R4GN57 208 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 EFCAB7A8K855 629 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 M0R129 80 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 M0R3G1 203 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 FAAHO00519 579 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 CASC3O15234 703 aaKnown RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 OR6B1O95007 311 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 LDOC1O95751 146 aaPredicted RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 CLK3P49761 638 aaKnown RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 ST13P50502 369 aaKnown RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 HSD17B7P56937 341 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 ELOAQ14241 798 aaKnown RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 MLC1Q15049 377 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 KLHL12Q53G59 568 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 PDZK1Q5T2W1 519 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 ZBTB46Q86UZ6 589 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 TMEM52Q8NDY8 209 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 SIMC1Q8NDZ2 872 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 TSLPQ969D9 159 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 MYDGFQ969H8 173 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 TM4SF19Q96DZ7 209 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 DNAJA3Q96EY1 480 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 ADOQ96SZ5 270 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 COPS4Q9BT78 406 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms