RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 GSDMCQ9BYG8 508 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 MMP28Q9H239 520 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 ADAM30Q9UKF2 790 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 FABP12A6NFH5 140 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 CLDN24A6NM45 220 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 BMP7P18075 431 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 C4BPBP20851 252 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 CAPZA2P47755 286 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 KCNJ5P48544 419 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 USF2Q15853 346 aaPredicted RBP15.34■□□□□ 0.05
CTCF-201ENST00000264010 IGSF11Q5DX21 431 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 MEDAGQ5VYS4 303 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 PIGKQ92643 395 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 MED30Q96HR3 178 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 MAP6Q96JE9 813 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 DPCDQ9BVM2 203 aaPredicted RBP15.34■□□□□ 0.05
CTCF-201ENST00000264010 TSSK6Q9BXA6 273 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 TRPV4Q9HBA0 871 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 CNOT2Q9NZN8 540 aaKnown RBP15.34■□□□□ 0.05
CTCF-201ENST00000264010 TRBV4-1A0A0J9YWV2 114 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 TBX19O60806 448 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 PRKAR1AP10644 381 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 HOXB9P17482 250 aaPredicted RBP15.34■□□□□ 0.05
CTCF-201ENST00000264010 DEFB134Q4QY38 66 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 LRRC25Q8N386 305 aaPredicted RBP15.34■□□□□ 0.05
CTCF-201ENST00000264010 MFSD9Q8NBP5 474 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 GNPDA2Q8TDQ7 276 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 RFKQ969G6 155 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 GAL3ST3Q96A11 431 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 ZNF304Q9HCX3 659 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 PLCXD1Q9NUJ7 323 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 RPS6KB2Q9UBS0 482 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 WDR45Q9Y484 360 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 CPSF4LA6NMK7 179 aaKnown RBP15.34■□□□□ 0.05
CTCF-201ENST00000264010 A8MVJ9 347 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 AK4P27144 223 aaPredicted RBP15.34■□□□□ 0.05
CTCF-201ENST00000264010 PTGER1P34995 402 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 ABHD17CQ6PCB6 329 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 BTLAQ7Z6A9 289 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 LAPTM4BQ86VI4 370 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 LRRC56Q8IYG6 542 aaPredicted RBP15.34■□□□□ 0.05
CTCF-201ENST00000264010 COX18Q8N8Q8 333 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 C11orf24Q96F05 449 aaPredicted RBP15.34■□□□□ 0.05
CTCF-201ENST00000264010 HHIPQ96QV1 700 aa15.34■□□□□ 0.05
CTCF-201ENST00000264010 MAP1BP46821 2468 aaKnown RBP15.33■□□□□ 0.05
CTCF-201ENST00000264010 RAB19A4D1S5 217 aa15.33■□□□□ 0.05
CTCF-201ENST00000264010 AIFM1O95831 613 aa15.33■□□□□ 0.05
CTCF-201ENST00000264010 IL7P13232 177 aa15.33■□□□□ 0.05
CTCF-201ENST00000264010 DSG2Q14126 1118 aa15.33■□□□□ 0.05
CTCF-201ENST00000264010 SWI5Q1ZZU3 235 aa15.33■□□□□ 0.05
CTCF-201ENST00000264010 C9orf50Q5SZB4 431 aa15.33■□□□□ 0.05
CTCF-201ENST00000264010 CELF2-AS1Q8N7Q2 184 aa15.33■□□□□ 0.05
CTCF-201ENST00000264010 OR2A1Q8NGT9 310 aa15.33■□□□□ 0.05
CTCF-201ENST00000264010 SERGEFQ9UGK8 458 aa15.33■□□□□ 0.05
CTCF-201ENST00000264010 H7C2Y5 167 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 CASC3O15234 703 aaKnown RBP15.33■□□□□ 0.04
CTCF-201ENST00000264010 CEACAM5P06731 702 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 HNRNPA2B1P22626 353 aaKnown RBP15.33■□□□□ 0.04
CTCF-201ENST00000264010 IDUAP35475 653 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 POU4F3Q15319 338 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 FAM209AQ5JX71 171 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 GTF2IRD2BQ6EKJ0 949 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 ARSKQ6UWY0 536 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 GTF2IRD2Q86UP8 949 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 ZNF285Q96NJ3 590 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 PINK1Q9BXM7 581 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 SLAMF7Q9NQ25 335 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 EXO1Q9UQ84 846 aaKnown RBP15.33■□□□□ 0.04
CTCF-201ENST00000264010 OR2A25A4D2G3 310 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 OR6C74A6NCV1 312 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 CSTF2P33240 577 aaKnown RBP eCLIP15.33■□□□□ 0.04
CTCF-201ENST00000264010 IGFALSP35858 605 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 MC3RP41968 323 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 NFATC4Q14934 902 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 TMEM44Q2T9K0 475 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 PLAG1Q6DJT9 500 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 FAM109BQ6ICB4 259 aaPredicted RBP15.33■□□□□ 0.04
CTCF-201ENST00000264010 BPHLQ86WA6 291 aaPredicted RBP15.33■□□□□ 0.04
CTCF-201ENST00000264010 ZNF431Q8TF32 576 aaPredicted RBP15.33■□□□□ 0.04
CTCF-201ENST00000264010 MCHR1Q99705 422 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 ACTRT3Q9BYD9 372 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 DSN1Q9H410 356 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 PIAS3Q9Y6X2 628 aa15.33■□□□□ 0.04
CTCF-201ENST00000264010 HMGN4O00479 90 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 TRIM23P36406 574 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 SHHQ15465 462 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 SIGIRRQ6IA17 410 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 BTN2A1Q7KYR7 527 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 VN1R5Q7Z5H4 357 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 SLC38A6Q8IZM9 456 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 FAM109AQ8N4B1 249 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 OR9A2Q8NGT5 310 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 RPL3LQ92901 407 aaKnown RBP15.32■□□□□ 0.04
CTCF-201ENST00000264010 CTRCQ99895 268 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 SLC6A17Q9H1V8 727 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 FGF22Q9HCT0 170 aa15.32■□□□□ 0.04
CTCF-201ENST00000264010 POLMQ9NP87 494 aaPredicted RBP15.32■□□□□ 0.04
CTCF-201ENST00000264010 PPIEQ9UNP9 301 aaKnown RBP15.32■□□□□ 0.04
CTCF-201ENST00000264010 MRPS33Q9Y291 106 aaKnown RBP15.32■□□□□ 0.04
CTCF-201ENST00000264010 B3GNT3Q9Y2A9 372 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms