RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 DUSP5Q16690 384 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 Q6ZS92 163 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 TAGAPQ8N103 731 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 CPSF7Q8N684 471 aaKnown RBP16.9■□□□□ 0.3
SDF4-201ENST00000263741 OR10G3Q8NGC4 313 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 OR5D16Q8NGK9 328 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 SFXN5Q8TD22 340 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 TMBIM1Q969X1 311 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 TP53INP1Q96A56 240 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 SPACA9Q96E40 222 aaPredicted RBP16.9■□□□□ 0.3
SDF4-201ENST00000263741 AURKBQ96GD4 344 aaPredicted RBP16.9■□□□□ 0.3
SDF4-201ENST00000263741 SLC35A5Q9BS91 424 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 TAS2R1Q9NYW7 299 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 IFI6P09912 130 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 GABRA3P34903 492 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 SLC34A1Q06495 639 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 KLF10Q13118 480 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 ZNF169Q14929 603 aaPredicted RBP16.89■□□□□ 0.29
SDF4-201ENST00000263741 PAGE3Q5JUK9 113 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 ANGPTL8Q6UXH0 198 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 ZNF621Q6ZSS3 439 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 C17orf47Q8NEP4 570 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 OR56A1Q8NGH5 318 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 EFHD2Q96C19 240 aaPredicted RBP16.89■□□□□ 0.29
SDF4-201ENST00000263741 OMA1Q96E52 524 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 LMF2Q9BU23 707 aaKnown RBP16.89■□□□□ 0.29
SDF4-201ENST00000263741 SLAMF8Q9P0V8 285 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 OR10H1Q9Y4A9 318 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 NPFFR2Q9Y5X5 522 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 A0A0G2JMM0 328 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 A0A1W2PPB8 328 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 A0A1W2PRS3 328 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 KIR3DP1A8MWS1 328 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 C1QL1O75973 258 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 FREM3P0C091 2139 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 DRD5P21918 477 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 GPR85P60893 370 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 KLRB1Q12918 225 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 TLR1Q15399 786 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 TRMT5Q32P41 509 aaKnown RBP16.89■□□□□ 0.29
SDF4-201ENST00000263741 ZNF791Q3KP31 576 aaPredicted RBP16.89■□□□□ 0.29
SDF4-201ENST00000263741 PRR30Q53SZ7 412 aaPredicted RBP16.89■□□□□ 0.29
SDF4-201ENST00000263741 OPN5Q6U736 354 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 GPR151Q8TDV0 419 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 GTF2H4Q92759 462 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 RMND5BQ96G75 393 aaPredicted RBP16.89■□□□□ 0.29
SDF4-201ENST00000263741 SLC35G5Q96KT7 338 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 VPS4AQ9UN37 437 aa16.89■□□□□ 0.29
SDF4-201ENST00000263741 NBASA2RRP1 2371 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 CAPN14A8MX76 684 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 B2RBV5 119 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 FBXO45P0C2W1 286 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 CCL3P10147 92 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 CHI3L1P36222 383 aaPredicted RBP16.88■□□□□ 0.29
SDF4-201ENST00000263741 NRG3P56975 720 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 SESN3P58005 492 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 PMP22Q01453 160 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 ZNHIT3Q15649 155 aaPredicted RBP16.88■□□□□ 0.29
SDF4-201ENST00000263741 ZNF766Q5HY98 468 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 PRAMEF20Q5VT98 475 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 BICRALQ6AI39 1079 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 C6orf120Q7Z4R8 191 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 NET1Q7Z628 596 aaPredicted RBP16.88■□□□□ 0.29
SDF4-201ENST00000263741 GOT1L1Q8NHS2 421 aaPredicted RBP16.88■□□□□ 0.29
SDF4-201ENST00000263741 CDS1Q92903 461 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 ITCHQ96J02 903 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 RMND5AQ9H871 391 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 STX18Q9P2W9 335 aaKnown RBP16.88■□□□□ 0.29
SDF4-201ENST00000263741 LRCH1Q9Y2L9 728 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 KCNE3Q9Y6H6 103 aa16.88■□□□□ 0.29
SDF4-201ENST00000263741 TRAV17A0A0B4J275 112 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 UQCRC2P22695 453 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 PTPN6P29350 595 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 DCAF7P61962 342 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 CCNJQ5T5M9 372 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 GALNTL5Q7Z4T8 443 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 SLC34A3Q8N130 599 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 CDRT4Q8N9R6 151 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 PNPLA2Q96AD5 504 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 MAP10Q9P2G4 905 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 SHANK1Q9Y566 2161 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 ACOX3O15254 700 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 UGT2B11O75310 529 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 KRT36O76013 467 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 MAP3K8P41279 467 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 PRIM2P49643 509 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 IRX1P78414 480 aaPredicted RBP16.87■□□□□ 0.29
SDF4-201ENST00000263741 MXRA7P84157 204 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 SAXO2Q658L1 398 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 TNFAIP8L2Q6P589 184 aaPredicted RBP16.87■□□□□ 0.29
SDF4-201ENST00000263741 LRRC74BQ6ZQY2 392 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 MSANTD1Q6ZTZ1 278 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 RETREG3Q86VR2 466 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 RNF130Q86XS8 419 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 HPS6Q86YV9 775 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 POU5F2Q8N7G0 328 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 PSD4Q8NDX1 1056 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 MOAP1Q96BY2 351 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 HSPBAP1Q96EW2 488 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 C5orf34Q96MH7 638 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms