RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 EMX1Q04741 257 aaPredicted RBP12.71□□□□□ -0.38
VMP1-201ENST00000262291 IL18R1Q13478 541 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 ELOAQ14241 798 aaKnown RBP12.71□□□□□ -0.38
VMP1-201ENST00000262291 SYT16Q17RD7 645 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 MLIPQ5VWP3 458 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 GTF2IRD2BQ6EKJ0 949 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 GTF2IRD2Q86UP8 949 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 KRT73Q86Y46 540 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 SLC38A6Q8IZM9 456 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 FBLIM1Q8WUP2 373 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 GIMAP5Q96F15 307 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 GABARAPL3Q9BY60 117 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 ALOXE3Q9BYJ1 711 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 GPN2Q9H9Y4 310 aaPredicted RBP12.71□□□□□ -0.38
VMP1-201ENST00000262291 BOLA1Q9Y3E2 137 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 ASNA1O43681 348 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 DLGAP3O95886 979 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 H1F0P07305 194 aaKnown RBP12.7□□□□□ -0.38
VMP1-201ENST00000262291 ANXA8P13928 327 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 ELAVL4P26378 380 aaKnown RBP12.7□□□□□ -0.38
VMP1-201ENST00000262291 MASP1P48740 699 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 DMWDQ09019 674 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 COLEC12Q5KU26 742 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 TMEM64Q6YI46 380 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 DGAT2L6Q6ZPD8 337 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 SUN5Q8TC36 379 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 ADAMTS15Q8TE58 950 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 HRASLS5Q96KN8 279 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 WDR12Q9GZL7 423 aaKnown RBP12.7□□□□□ -0.38
VMP1-201ENST00000262291 SLC38A1Q9H2H9 487 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 GPR27Q9NS67 375 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 FBXO34Q9NWN3 711 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 UGT2A1Q9Y4X1 527 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 SLC22A7Q9Y694 548 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 METTL12A8MUP2 240 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 CHURC1-FNTBB4DL54 471 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 DPM1O60762 260 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 UBXN7O94888 489 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 CT62P0C5K7 136 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 CPMP14384 443 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 CBLP22681 906 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 TLX1P31314 330 aaPredicted RBP12.7□□□□□ -0.38
VMP1-201ENST00000262291 PTGES3Q15185 160 aaKnown RBP12.7□□□□□ -0.38
VMP1-201ENST00000262291 ZNF311Q5JNZ3 666 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 ANKK1Q8NFD2 765 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 NDNFQ8TB73 568 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 SLC7A13Q8TCU3 470 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 PIK3R3Q92569 461 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 TGM7Q96PF1 710 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 IL4I1Q96RQ9 567 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 CDX2Q99626 313 aaPredicted RBP12.7□□□□□ -0.38
VMP1-201ENST00000262291 ZNF226Q9NYT6 803 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 PHF11Q9UIL8 331 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 TMCC3Q9ULS5 477 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 A4GNTQ9UNA3 340 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 POFUT2Q9Y2G5 429 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 PCDHGA10Q9Y5H3 936 aa12.7□□□□□ -0.38
VMP1-201ENST00000262291 ZSCAN5BA6NJL1 495 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 CPSF4LA6NMK7 179 aaKnown RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 TLR4O00206 839 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 ZNF217O75362 1048 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 NADKO95544 446 aaPredicted RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 PCMT1P22061 227 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 CD27P26842 260 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 C21orf33P30042 268 aaPredicted RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 GGT2P36268 569 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 TSFMP43897 325 aaKnown RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 MAN2A2P49641 1150 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 BLKP51451 505 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 GP2P55259 537 aaKnown RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 DUSP5Q16690 384 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 DCST1Q5T197 706 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 RSBN1Q5VWQ0 802 aaPredicted RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 PODNL1Q6PEZ8 512 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 BHLHB9Q6PI77 547 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 SLC16A12Q6ZSM3 486 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 BCDIN3DQ7Z5W3 292 aaKnown RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 BPHLQ86WA6 291 aaPredicted RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 IQCF1Q8N6M8 205 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 SFXN5Q8TD22 340 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 PITX2Q99697 317 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 TUBA1CQ9BQE3 449 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 ZSCAN32Q9NX65 697 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 POMT2Q9UKY4 750 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 ENTPD2Q9Y5L3 495 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 CACNA1IQ9P0X4 2223 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 A0A1W2PR77 199 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 URADA6NGE7 173 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 OR5K4A6NMS3 321 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 SPNP16150 400 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 PRKCAP17252 672 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 CHMP24386 653 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 TARDBPQ13148 414 aaKnown RBP eCLIP12.69□□□□□ -0.38
VMP1-201ENST00000262291 TOP3AQ13472 1001 aaPredicted RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 KCNAB1Q14722 419 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 GPR68Q15743 365 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 FAAH2Q6GMR7 532 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 SIGIRRQ6IA17 410 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 ZNF770Q6IQ21 691 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms