RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 CSAG2Q9Y5P2 127 aa10.71□□□□□ -0.69
PFDN1-201ENST00000261813 TNRC6AQ8NDV7 1962 aaKnown RBP10.71□□□□□ -0.7
PFDN1-201ENST00000261813 DOCK10Q96BY6 2186 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 CLIC1O00299 241 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 C6orf47O95873 294 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 WDPCPO95876 746 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 F10P00742 488 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 NQO1P15559 274 aaKnown RBP10.7□□□□□ -0.7
PFDN1-201ENST00000261813 EFNA1P20827 205 aaPredicted RBP10.7□□□□□ -0.7
PFDN1-201ENST00000261813 ME2P23368 584 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 SLC6A2P23975 617 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 PRR5P85299 388 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 MEP1AQ16819 746 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 FHL5Q5TD97 284 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 ABHD17BQ5VST6 288 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 TMEM107Q6UX40 140 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 IGFL3Q6UXB1 125 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 ANKRD46Q86W74 232 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 LGI4Q8N135 537 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 RBMXL3Q8N7X1 1067 aaKnown RBP10.7□□□□□ -0.7
PFDN1-201ENST00000261813 OR7G2Q8NG99 324 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 OR52R1Q8NGF1 315 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 SFXN5Q8TD22 340 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 POP5Q969H6 163 aaKnown RBP10.7□□□□□ -0.7
PFDN1-201ENST00000261813 ZNF837Q96EG3 531 aaPredicted RBP10.7□□□□□ -0.7
PFDN1-201ENST00000261813 MUC13Q9H3R2 512 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 EPS8L2Q9H6S3 715 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 THUMPD1Q9NXG2 353 aaKnown RBP10.7□□□□□ -0.7
PFDN1-201ENST00000261813 PLA2G3Q9NZ20 509 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 STMN3Q9NZ72 180 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 ABCD2Q9UBJ2 740 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 TEKT2Q9UIF3 430 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 DTX4Q9Y2E6 619 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 CPAMD8Q8IZJ3 1885 aa10.7□□□□□ -0.7
PFDN1-201ENST00000261813 TRBV5-3A0A0A0MS03 114 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 OR6C76A6NM76 312 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 FXYD1O00168 92 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 WWP2O00308 870 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 PLOD2O00469 737 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 PLOD3O60568 738 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 ZNF354AO60765 605 aaPredicted RBP10.69□□□□□ -0.7
PFDN1-201ENST00000261813 GMNNO75496 209 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 ITGA10O75578 1167 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 BCAS2O75934 225 aaPredicted RBP10.69□□□□□ -0.7
PFDN1-201ENST00000261813 CHI3L1P36222 383 aaPredicted RBP10.69□□□□□ -0.7
PFDN1-201ENST00000261813 MC3RP41968 323 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 CDK9P50750 372 aaKnown RBP10.69□□□□□ -0.7
PFDN1-201ENST00000261813 SLC7A2P52569 658 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 HBA1P69905 142 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 BNIP2Q12982 314 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 HSPB3Q12988 150 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 SPDYE7PQ495Y7 208 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 ZNF468Q5VIY5 522 aaPredicted RBP10.69□□□□□ -0.7
PFDN1-201ENST00000261813 PTRH1Q86Y79 214 aaKnown RBP10.69□□□□□ -0.7
PFDN1-201ENST00000261813 HPS6Q86YV9 775 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 SLC15A3Q8IY34 581 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 CLECL1Q8IZS7 167 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 ZNF441Q8N8Z8 693 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 OR56A1Q8NGH5 318 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 C16orf52Q8NHV5 167 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 FBXO27Q8NI29 283 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 NUBPLQ8TB37 319 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 TM9SF4Q92544 642 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 INPP5KQ9BT40 448 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 WWTR1Q9GZV5 400 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 TPT1P8Q9HAU6 139 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 VAPAQ9P0L0 249 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 MYOTQ9UBF9 498 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.69□□□□□ -0.7
PFDN1-201ENST00000261813 SPENQ96T58 3664 aaKnown RBP10.69□□□□□ -0.7
PFDN1-201ENST00000261813 MYO18BQ8IUG5 2567 aa10.69□□□□□ -0.7
PFDN1-201ENST00000261813 A0A087WV62 115 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 H0YHG0 523 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 UPK1AO00322 258 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 EMC8O43402 210 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 DPM1O60762 260 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 PRAMEF2O60811 474 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 NME6O75414 186 aaPredicted RBP10.68□□□□□ -0.7
PFDN1-201ENST00000261813 OR2J2O76002 312 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 NADKO95544 446 aaPredicted RBP10.68□□□□□ -0.7
PFDN1-201ENST00000261813 GSNP06396 782 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 ABCB1P08183 1280 aaPredicted RBP10.68□□□□□ -0.7
PFDN1-201ENST00000261813 HSD17B1P14061 328 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 GPX2P18283 190 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 PTPN6P29350 595 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 CCT3P49368 545 aaKnown RBP10.68□□□□□ -0.7
PFDN1-201ENST00000261813 EMDP50402 254 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 ARG2P78540 354 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 DMTNQ08495 405 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 TRAP1Q12931 704 aaKnown RBP10.68□□□□□ -0.7
PFDN1-201ENST00000261813 NFATC3Q12968 1075 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 FADDQ13158 208 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 TP53BP2Q13625 1128 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 TUBA3CQ13748 450 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 CAPRIN1Q14444 709 aaKnown RBP10.68□□□□□ -0.7
PFDN1-201ENST00000261813 NADK2Q4G0N4 442 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 PIGGQ5H8A4 983 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 COLEC12Q5KU26 742 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 ERICH5Q6P6B1 374 aa10.68□□□□□ -0.7
PFDN1-201ENST00000261813 PGM2L1Q6PCE3 622 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms