RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 OR10H1Q9Y4A9 318 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 ABCA4P78363 2273 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 MYO1GB0I1T2 1018 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 ABCB7O75027 752 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 CRCPO75575 148 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 TMIGD3P0DMS9 266 aaPredicted RBP17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 CPN1P15169 458 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 MC3RP41968 323 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 GFRA1P56159 465 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 EFR3AQ14156 821 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 ENPP6Q6UWR7 440 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 TMEM107Q6UX40 140 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 LINC01560Q8TB33 94 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 CCDC126Q96EE4 140 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 MIEF1Q9NQG6 463 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 RASSF1Q9NS23 344 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 CBLCQ9ULV8 474 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 RPH3AQ9Y2J0 694 aaPredicted RBP17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 PCNX3Q9H6A9 2034 aa17.26■□□□□ 0.35
TM6SF1-201ENST00000258909 A6NNC1 897 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 SCO2O43819 266 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 GRK2P25098 689 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 SRD5A2P31213 254 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 OPRM1P35372 400 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 PNLIPRP2P54317 469 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 PSG6Q00889 435 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 CFAP157Q5JU67 520 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 FAM71E1Q6IPT2 247 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 FRMD7Q6ZUT3 714 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 CCDC63Q8NA47 563 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.25■□□□□ 0.353e-7■■■□□ 15.7
TM6SF1-201ENST00000258909 UBLCP1Q8WVY7 318 aaPredicted RBP17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 SFXN2Q96NB2 322 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 G6PC3Q9BUM1 346 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 GLIPR2Q9H4G4 154 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 CCM2LQ9NUG4 571 aaPredicted RBP17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 FLRT3Q9NZU0 649 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 DKKL1Q9UK85 242 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 PTGDR2Q9Y5Y4 395 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 NF1P21359 2839 aa17.25■□□□□ 0.35
TM6SF1-201ENST00000258909 CLCA1A8K7I4 914 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 PLIN3O60664 434 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 CD1EP15812 388 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 PEX19P40855 299 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 GAS1P54826 345 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 CLEC6AQ6EIG7 209 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 TRIM46Q7Z4K8 759 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 GCNT2Q8N0V5 402 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 FAM222BQ8WU58 562 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 INTS12Q96CB8 462 aaKnown RBP17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 EGLN2Q96KS0 407 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 MYNNQ9NPC7 610 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 FAM221AA4D161 298 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 TUBAL3A6NHL2 446 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 ZIC3O60481 467 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 DPP4P27487 766 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 GSTM5P46439 218 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 LHX2P50458 406 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 NOXRED1Q6NXP6 359 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 AAGABQ6PD74 315 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 LUZP2Q86TE4 346 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 CDC20BQ86Y33 519 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 OR4K17Q8NGC6 315 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 EPS8L3Q8TE67 593 aaKnown RBP17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 GFM2Q969S9 779 aaKnown RBP17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 STMN4Q9H169 189 aaPredicted RBP17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 DSN1Q9H410 356 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 OXSMQ9NWU1 459 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 JKAMPQ9P055 326 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 FOXD3Q9UJU5 478 aaPredicted RBP17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 GRID1Q9ULK0 1009 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 PLEKHA6Q9Y2H5 1048 aa17.24■□□□□ 0.35
TM6SF1-201ENST00000258909 ZNF469Q96JG9 3925 aaPredicted RBP17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 UPK1AO00322 258 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 PLOD2O00469 737 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 COQ9O75208 318 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 CPA3P15088 417 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 EVI2BP34910 448 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 CRHR1P34998 444 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 RFX3P48380 749 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 CCT5P48643 541 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 CLDN18P56856 261 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 DNAJB13P59910 316 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 STX5Q13190 355 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 GAB1Q13480 694 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 CCDC153Q494R4 210 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 ANKRD26P1Q6NSI1 321 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 ADGRE4PQ86SQ3 457 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 C4orf33Q8N1A6 199 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 GOT1L1Q8NHS2 421 aaPredicted RBP17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 RNF138Q8WVD3 245 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 RMND5BQ96G75 393 aaPredicted RBP17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 AMDHD1Q96NU7 426 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 RTN4RQ9BZR6 473 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 RRAGDQ9NQL2 400 aaPredicted RBP17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 DDX18Q9NVP1 670 aaKnown RBP17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 PPP4R1LQ9P1A2 415 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 ST6GALNAC2Q9UJ37 374 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 C19orf53Q9UNZ5 99 aaPredicted RBP17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 FIS1Q9Y3D6 152 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms