RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 LCLAT1Q6UWP7 414 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF836Q6ZNA1 936 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 LRRC28Q86X40 367 aaPredicted RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 ARHGAP12Q8IWW6 846 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 PQLC3Q8N755 202 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 OR11L1Q8NGX0 322 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 OR4C6Q8NH72 309 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 ERMAPQ96PL5 475 aaPredicted RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 SIGLEC11Q96RL6 698 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 GFM1Q96RP9 751 aaKnown RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 TMEM209Q96SK2 561 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 MESP1Q9BRJ9 268 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 FEM1AQ9BSK4 669 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 H2AFJQ9BTM1 129 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 EMC7Q9NPA0 242 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 MGAT4CQ9UBM8 478 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 MUTYHQ9UIF7 546 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 NENFQ9UMX5 172 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 COL18A1P39060 1754 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 PAPPAQ13219 1627 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 CCDC187A0A096LP49 1063 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 A0A0A6YYC8 382 aaPredicted RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 A0A0J9YYE9 177 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 CLDN24A6NM45 220 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 I3L1I5 382 aaPredicted RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 NRP1O14786 923 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 DSCR3O14972 297 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 NME2P1O60361 137 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 TRIM13O60858 407 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 AKAP3O75969 853 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 BRI3O95415 125 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 CLDN9O95484 217 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 TRBC1P01850 177 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 GCP02774 474 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 RHOP08100 348 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 MMP2P08253 660 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 CD8BP10966 210 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 PGAM1P18669 254 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 HNRNPA2B1P22626 353 aaKnown RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 PRKCHP24723 683 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 CD82P27701 267 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 KCNJ1P48048 391 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF616Q08AN1 781 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 PRAMEF8Q5VWM4 474 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 PRAMEF7Q5VXH5 474 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 TTC23Q5W5X9 447 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 DPY19L2P2Q6ZN68 376 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 TECPR1Q7Z6L1 1165 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 KCNMB4Q86W47 210 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 WDFY1Q8IWB7 410 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 NRMQ8IXM6 262 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 PDZD9Q8IXQ8 264 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF655Q8N720 491 aaPredicted RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 OR5M8Q8NGP6 311 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 OR2L2Q8NH16 312 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 HASPINQ8TF76 798 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 COQ8BQ96D53 544 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 FCRL1Q96LA6 429 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 MS4A4EQ96PG1 132 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 URM1Q9BTM9 101 aaKnown RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 EGLN1Q9GZT9 426 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 CDCP1Q9H5V8 836 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 ASAH2Q9NR71 780 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 SPHK2Q9NRA0 654 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 IMP3Q9NV31 184 aaKnown RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 PAK5Q9P286 719 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 IKZF3Q9UKT9 509 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 ST3GAL5Q9UNP4 418 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 SHANK3Q9BYB0 1731 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 A0A0G2JN53 185 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 TRBV11-1A0A0K0K1C0 115 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 TCRBV3S1A0A5B6 114 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 COLCA2A8K830 154 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 EI24O14681 340 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 HBP1O60381 514 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 TAF5LO75529 589 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 DDAH1O94760 285 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SIX6O95475 246 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 MT-ND5P03915 603 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 IL7RP16871 459 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 BMP7P18075 431 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 CD96P40200 585 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 KLF3P57682 345 aaPredicted RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 RPL19P84098 196 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SLC10A7Q0GE19 358 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 TSTQ16762 297 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 IMPG1Q17R60 797 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 GLYATQ6IB77 296 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SLC47A2Q86VL8 602 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 UXS1Q8NBZ7 420 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 OR9Q1Q8NGQ5 310 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 OR1S1Q8NH92 325 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 FAM222BQ8WU58 562 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ABHD3Q8WU67 409 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ACOT11Q8WXI4 607 aaPredicted RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 OSTF1Q92882 214 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 GTPBP3Q969Y2 492 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 CPXM1Q96SM3 734 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 STACQ99469 402 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 POP1Q99575 1024 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms