RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 LSSP48449 732 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 TAS2R41P59536 307 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 GINS1Q14691 196 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 INAVAQ3KP66 663 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 ZNF404Q494X3 552 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 PAQR6Q6TCH4 344 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 USP43Q70EL4 1123 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 LRRC25Q8N386 305 aaPredicted RBP17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 SLC9A6Q92581 669 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 CDS1Q92903 461 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 TM4SF19Q96DZ7 209 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 TSSK6Q9BXA6 273 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 SEMA4GQ9NTN9 838 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 DAPK2Q9UIK4 370 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 ARHGEF17Q96PE2 2063 aaPredicted RBP17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 PRAMEF26H0Y7S4 382 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 ARHGAP33O14559 1287 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 HNRNPCP07910 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 PIPP12273 146 aaPredicted RBP17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 LIMK1P53667 647 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 MAP4K2Q12851 820 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 KIR2DS3Q14952 304 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 TMEM201Q5SNT2 666 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 FIGLAQ6QHK4 219 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 ATCAYQ86WG3 371 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 SLC34A3Q8N130 599 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 SLC22A18ASQ8N1D0 253 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 OR13H1Q8NG92 308 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 OR8J1Q8NGP2 316 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 C9orf43Q8TAL5 461 aaPredicted RBP17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 SLC22A18Q96BI1 424 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 OPALINQ96PE5 141 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 ACTRT3Q9BYD9 372 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 GIN1Q9NXP7 522 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 CNIH4Q9P003 139 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 HS3ST3A1Q9Y663 406 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 C10orf142B7Z368 130 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 CBFA2T3O75081 653 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 SOX18P35713 384 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 CCR5P51681 352 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 YPEL5P62699 121 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 MFSD4BQ5TF39 518 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 MFSD12Q6NUT3 480 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 C1orf94Q6P1W5 598 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 LINC00299Q6ZSB3 139 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 PRICKLE2Q7Z3G6 844 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 ZNF554Q86TJ5 538 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 ZNF761Q86XN6 746 aaPredicted RBP17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 TRIM48Q8IWZ4 208 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 ADAMTS15Q8TE58 950 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 TRNT1Q96Q11 434 aaKnown RBP17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 ARHGDIGQ99819 225 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 CENPVL1A0A0U1RR11 272 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 PCYT1AP49585 367 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 RNF144AP50876 292 aaPredicted RBP17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 PPP1CAP62136 330 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 TUBA1BP68363 451 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 ATAD3BQ5T9A4 648 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 TUBA1AQ71U36 451 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 NELL2Q99435 816 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 CDADC1Q9BWV3 514 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 SLC13A4Q9UKG4 626 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 PILRAQ9UKJ1 303 aa17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 LSM2Q9Y333 95 aaKnown RBP17.49■□□□□ 0.39
PDLIM4-201ENST00000253754 SDK1Q7Z5N4 2213 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 FUOMA2VDF0 154 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 BOLA2-SMG1P6H3BVE0 249 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 ASNA1O43681 348 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 ZNF217O75362 1048 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 CSO75390 466 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 APOL3O95236 402 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 SMIM10L1P0DMW3 83 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 GIPRP48546 466 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 ALDH6A1Q02252 535 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 SUZ12Q15022 739 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 TRIM16LQ309B1 348 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 CCNJQ5T5M9 372 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 DEFB119Q8N690 84 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 OR5T3Q8NGG3 340 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 OR52P1PQ8NH57 321 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 TMEM80Q96HE8 168 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 SMIM10Q96HG1 83 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 FAM46AQ96IP4 442 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 LRR1Q96L50 414 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 TBC1D17Q9HA65 648 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 POLE4Q9NR33 117 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 DAPP1Q9UN19 280 aa17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 TDRD6O60522 2096 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-201ENST00000253754 IGHV1OR15-9A0A0B4J2B8 117 aa17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 LDB3O75112 727 aa17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 CYP7B1O75881 506 aa17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 CSTF2P33240 577 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 FAM214AQ32MH5 1076 aa17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 TRMT12Q53H54 448 aaKnown RBP17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 SYT14P1Q58G82 188 aa17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 PRAMEF8Q5VWM4 474 aa17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 PRAMEF7Q5VXH5 474 aa17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 CD300LDQ6UXZ3 194 aa17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 FRRS1Q6ZNA5 592 aa17.47■□□□□ 0.39
PDLIM4-201ENST00000253754 ABI3BPQ7Z7G0 1075 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms