RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 MRPS15P82914 257 aaKnown RBP13.49□□□□□ -0.25
HIF3A-202ENST00000244303 PRR5P85299 388 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 GPR50Q13585 617 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 ENPP2Q13822 863 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 AGERQ15109 404 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 CLEC12AQ5QGZ9 265 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 SYCE2Q6PIF2 218 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 FAM131AQ6UXB0 335 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 UBQLNLQ8IYU4 475 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 ANKK1Q8NFD2 765 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 JPH3Q8WXH2 748 aaPredicted RBP13.49□□□□□ -0.25
HIF3A-202ENST00000244303 MOAP1Q96BY2 351 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 TIMM29Q9BSF4 260 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 PBX4Q9BYU1 374 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 OR2B2Q9GZK3 357 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 LMAN2LQ9H0V9 348 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 POLMQ9NP87 494 aaPredicted RBP13.49□□□□□ -0.25
HIF3A-202ENST00000244303 TOR4AQ9NXH8 423 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 SPHK1Q9NYA1 384 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 APOBEC3BQ9UH17 382 aaKnown RBP13.49□□□□□ -0.25
HIF3A-202ENST00000244303 CHST2Q9Y4C5 530 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 A0A1W2PQ09 198 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 A0A1W2PQL4 384 aaPredicted RBP13.48□□□□□ -0.25
HIF3A-202ENST00000244303 TMEM129A0AVI4 362 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 EPOPA6NHQ4 379 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 STK25O00506 426 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 RGS13O14921 159 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 LINC01565O15544 149 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 CEACAM5P06731 702 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 SDC2P34741 201 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 TRHRP34981 398 aaPredicted RBP13.48□□□□□ -0.25
HIF3A-202ENST00000244303 AHRP35869 848 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 CD79BP40259 229 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 HOXC5Q00444 222 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 TSPAN31Q12999 210 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 TRAM2Q15035 370 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 TAB1Q15750 504 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 PLK5Q496M5 336 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 MINDY4Q4G0A6 757 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 ZNF730Q6ZMV8 503 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 MRGPREQ86SM8 312 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 GATAD2AQ86YP4 633 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 CLDN22Q8N7P3 220 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 SYT14Q8NB59 555 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 GALNT6Q8NCL4 622 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 DIO2Q92813 273 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 C1GALT1C1Q96EU7 318 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 CDCA3Q99618 268 aaPredicted RBP13.48□□□□□ -0.25
HIF3A-202ENST00000244303 TM9SF2Q99805 663 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 ARHGDIGQ99819 225 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 BTBD1Q9H0C5 482 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 SLC13A4Q9UKG4 626 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 SF3B6Q9Y3B4 125 aaKnown RBP13.48□□□□□ -0.25
HIF3A-202ENST00000244303 TRANK1O15050 2925 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 SNTNA6NMZ2 147 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 SYT5O00445 386 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 C5AR1P21730 350 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 MPIP34949 423 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 IFNGR2P38484 337 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 AVPR1BP47901 424 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 TGM3Q08188 693 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 LRRC32Q14392 662 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 LTB4RQ15722 352 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 GLYR1Q49A26 553 aaPredicted RBP13.48□□□□□ -0.25
HIF3A-202ENST00000244303 PRAMEF8Q5VWM4 474 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 PRAMEF7Q5VXH5 474 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 ZNF517Q6ZMY9 492 aaPredicted RBP13.48□□□□□ -0.25
HIF3A-202ENST00000244303 NUDT18Q6ZVK8 323 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 LILRB4Q8NHJ6 448 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 KAT2AQ92830 837 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 ELP4Q96EB1 424 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 MSLNLQ96KJ4 702 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 KCTD7Q96MP8 289 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 SLC38A2Q96QD8 506 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 NPAP1Q9NZP6 1156 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 NTNG1Q9Y2I2 539 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 GRIP1Q9Y3R0 1128 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 GPSM3Q9Y4H4 160 aa13.48□□□□□ -0.25
HIF3A-202ENST00000244303 IRGMA1A4Y4 181 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 FAM172BPA6NC97 362 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 KDM4EB2RXH2 506 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-202ENST00000244303 RFXAPO00287 272 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 PROM1O43490 865 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 CH25HO95992 272 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 ADH1BP00325 375 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 LIMS3P0CW19 117 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 LIMS4P0CW20 117 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 OMPP47874 163 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 SOX9P48436 509 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 SLC9A3P48764 834 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 ST3GAL3Q11203 375 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 TPBGQ13641 420 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 ITPRIPL2Q3MIP1 535 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 CRTC2Q53ET0 693 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-202ENST00000244303 PARM1Q6UWI2 310 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 RASSF6Q6ZTQ3 369 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 RRM2BQ7LG56 351 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 ZFP41Q8N8Y5 198 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 FAM181AQ8N9Y4 354 aa13.47□□□□□ -0.25
HIF3A-202ENST00000244303 OR6F1Q8NGZ6 308 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms