RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SLC35E2P0CK97 266 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 AVPR1BP47901 424 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 GFERP55789 205 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 TAS2R41P59536 307 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 COX10Q12887 443 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 ZCCHC12Q6PEW1 402 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 PTCHD4Q6ZW05 846 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 Q7L0L9 218 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 CDRT4Q8N9R6 151 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 NR4A3Q92570 626 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 MYDGFQ969H8 173 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 YIPF6Q96EC8 236 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 TRIM45Q9H8W5 580 aaPredicted RBP17.24■□□□□ 0.35
HOXC11-201ENST00000243082 C11orf16Q9NQ32 467 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 DUSP22Q9NRW4 184 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 SEMA4GQ9NTN9 838 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 KLHL28Q9NXS3 571 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 GPR83Q9NYM4 423 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 A0A087WUU8 490 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 CPSF4LA6NMK7 179 aaKnown RBP17.23■□□□□ 0.35
HOXC11-201ENST00000243082 MPZL2O60487 215 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 CYP7B1O75881 506 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 HOXC5Q00444 222 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 ALDH6A1Q02252 535 aaKnown RBP17.23■□□□□ 0.35
HOXC11-201ENST00000243082 DUSP8Q13202 625 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 AQP6Q13520 282 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 CTF1Q16619 201 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 UBE2UQ5VVX9 321 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 C12orf73Q69YU5 71 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 PEX5LQ8IYB4 626 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 PIK3R3Q92569 461 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 STACQ99469 402 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 RBCK1Q9BYM8 510 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 SAP130Q9H0E3 1048 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 HCN3Q9P1Z3 774 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 SATB2Q9UPW6 733 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 IGHV5-51A0A0C4DH38 117 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 AGAP5A6NIR3 686 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 H3BN98 237 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 STK25O00506 426 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 BCAS1O75363 584 aaPredicted RBP17.23■□□□□ 0.35
HOXC11-201ENST00000243082 LCKP06239 509 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 ZNF182P17025 639 aaPredicted RBP17.23■□□□□ 0.35
HOXC11-201ENST00000243082 NR4A1P22736 598 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 PSMB9P28065 219 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 SRSF5Q13243 272 aaKnown RBP17.23■□□□□ 0.35
HOXC11-201ENST00000243082 C14orf28Q4W4Y0 310 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 DCST2Q5T1A1 773 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 ZNF836Q6ZNA1 936 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 SDR16C5Q8N3Y7 309 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 SPACA7Q96KW9 195 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 TGM7Q96PF1 710 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 FBXO34Q9NWN3 711 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 ZNF232Q9UNY5 417 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 NTNG1Q9Y2I2 539 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 THADAQ6YHU6 1953 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 LAMA1P25391 3075 aa17.23■□□□□ 0.35
HOXC11-201ENST00000243082 SH3D21A4FU49 640 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 TGFBR3LH3BV60 316 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 K7ESF4 209 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 PIAS2O75928 621 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 CBX7O95931 251 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 CCNYL3P0C7X3 344 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 FOSL2P15408 326 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 RPS4Y1P22090 263 aaKnown RBP17.22■□□□□ 0.35
HOXC11-201ENST00000243082 RGS8P57771 180 aaPredicted RBP17.22■□□□□ 0.35
HOXC11-201ENST00000243082 SNRPGP62308 76 aaKnown RBP17.22■□□□□ 0.35
HOXC11-201ENST00000243082 EEF1A1P68104 462 aaKnown RBP17.22■□□□□ 0.35
HOXC11-201ENST00000243082 GPR68Q15743 365 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 MAPK14Q16539 360 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 NDUFA9Q16795 377 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 ENTPD8Q5MY95 495 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 SLC36A4Q6YBV0 504 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 B3GNT7Q8NFL0 401 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 DNASE2BQ8WZ79 361 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 SLC38A4Q969I6 547 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 PLCL2Q9UPR0 1127 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 CEP192Q8TEP8 1941 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 SPAG17Q6Q759 2223 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 SPTBP11277 2137 aa17.22■□□□□ 0.35
HOXC11-201ENST00000243082 STX11O75558 287 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 NTN1O95631 604 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 THY1P04216 161 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 THBS1P07996 1170 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 STSP08842 583 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 RNH1P13489 461 aaKnown RBP17.21■□□□□ 0.35
HOXC11-201ENST00000243082 TNNI3P19429 210 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 S1PR1P21453 382 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 ST13P50502 369 aaKnown RBP17.21■□□□□ 0.35
HOXC11-201ENST00000243082 MAT1AQ00266 395 aaKnown RBP17.21■□□□□ 0.35
HOXC11-201ENST00000243082 ST3GAL3Q11203 375 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 MAP4K2Q12851 820 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 FAM53BQ14153 422 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 SPCS2Q15005 226 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 LARS2Q15031 903 aaKnown RBP17.21■□□□□ 0.35
HOXC11-201ENST00000243082 TRAM2Q15035 370 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 TBCEQ15813 527 aaPredicted RBP17.21■□□□□ 0.35
HOXC11-201ENST00000243082 NKAIN2Q5VXU1 208 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 ZNF619Q8N2I2 560 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 COX18Q8N8Q8 333 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms