RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 LCN1P1Q5VSP4 162 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 PPP2R2DQ66LE6 453 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 MRM1Q6IN84 353 aaKnown RBP17.56■□□□□ 0.4
CPSF3-201ENST00000238112 SLC48A1Q6P1K1 146 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 C16orf62Q7Z3J2 963 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 ATP6V1C2Q8NEY4 427 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 OR2L5Q8NG80 312 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 DIO2Q92813 273 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 OSTF1Q92882 214 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 KLHL28Q9NXS3 571 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 LIPT1Q9Y234 373 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 NUMA1Q14980 2115 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 MUC22E2RYF6 1773 aaPredicted RBP17.56■□□□□ 0.4
CPSF3-201ENST00000238112 TRDV1A0A1B0GX56 115 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 A0A1W2PS29 197 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 B4DXG7 233 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 CSF2P04141 144 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 CERS1P27544 350 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 CD79BP40259 229 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 OMPP47874 163 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 DMPKQ09013 629 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 DSG2Q14126 1118 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 TMEM44Q2T9K0 475 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 SLC30A6Q6NXT4 461 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 CD200R1LQ6Q8B3 271 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 GALNT12Q8IXK2 581 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 UBE2J2Q8N2K1 259 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 ZG16BQ96DA0 208 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 ANKRD19PQ9H560 264 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 TRIM45Q9H8W5 580 aaPredicted RBP17.55■□□□□ 0.4
CPSF3-201ENST00000238112 RNF121Q9H920 327 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 SLC6A20Q9NP91 592 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 HEATR5BQ9P2D3 2071 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 NTN1O95631 604 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 F3P13726 295 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 DRD3P35462 400 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 SOX18P35713 384 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 QPRTQ15274 297 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 FAM78AQ5JUQ0 283 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 TRIQKQ629K1 86 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 PLEKHM3Q6ZWE6 761 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 ASCC1Q8N9N2 400 aaKnown RBP17.55■□□□□ 0.4
CPSF3-201ENST00000238112 POGLUT1Q8NBL1 392 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 C19orf18Q8NEA5 215 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 OR9A2Q8NGT5 310 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 SLC7A6Q92536 515 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 SMG7Q92540 1137 aaKnown RBP17.55■□□□□ 0.4
CPSF3-201ENST00000238112 TMED9Q9BVK6 235 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 TBC1D17Q9HA65 648 aa17.55■□□□□ 0.4
CPSF3-201ENST00000238112 NDRG2Q9UN36 371 aaKnown RBP17.55■□□□□ 0.4
CPSF3-201ENST00000238112 ANTXRLA6NF34 631 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 MID1O15344 667 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 CHST10O43529 356 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 AKAP8O43823 692 aaKnown RBP17.54■□□□□ 0.4
CPSF3-201ENST00000238112 SLC2A2P11168 524 aaPredicted RBP17.54■□□□□ 0.4
CPSF3-201ENST00000238112 TRHRP34981 398 aaPredicted RBP17.54■□□□□ 0.4
CPSF3-201ENST00000238112 TRIM23P36406 574 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 STAT5AP42229 794 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 VEGFBP49765 207 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 RAB8AP61006 207 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 CDK10Q15131 360 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 KLHL36Q8N4N3 616 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 SRFBP1Q8NEF9 429 aaKnown RBP17.54■□□□□ 0.4
CPSF3-201ENST00000238112 OR4F15Q8NGB8 312 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 OR52E1Q8NGJ3 308 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 UBASH3BQ8TF42 649 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 COQ7Q99807 217 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 TTYH2Q9BSA4 534 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 BTBD1Q9H0C5 482 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 PHPT1Q9NRX4 125 aaPredicted RBP17.54■□□□□ 0.4
CPSF3-201ENST00000238112 NUFIP1Q9UHK0 495 aaKnown RBP17.54■□□□□ 0.4
CPSF3-201ENST00000238112 ZNF780BQ9Y6R6 833 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 TTC36A6NLP5 189 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 SURF4O15260 269 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 HLA-DPB1P04440 258 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 FPR3P25089 353 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 AHRP35869 848 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 ATP6V1E1P36543 226 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 RGS8P57771 180 aaPredicted RBP17.54■□□□□ 0.4
CPSF3-201ENST00000238112 HOXC5Q00444 222 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 IRF4Q15306 451 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 ZNF485Q8NCK3 441 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 ACOT11Q8WXI4 607 aaPredicted RBP17.54■□□□□ 0.4
CPSF3-201ENST00000238112 ELP4Q96EB1 424 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 CES1P1Q9UKY3 287 aa17.54■□□□□ 0.4
CPSF3-201ENST00000238112 A6NL46 340 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 OR52A4PA6NMU1 304 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 PLA2G10O15496 165 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 HCN1O60741 890 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 PRKAR1BP31321 381 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 ABATP80404 500 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 AGBL4Q5VU57 503 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 AADACL4Q5VUY2 407 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 CNIH2Q6PI25 160 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 MARCH9Q86YJ5 346 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 NKAIN4Q8IVV8 208 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 Q8N402 240 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 OR4Q3Q8NH05 313 aa17.53■□□□□ 0.4
CPSF3-201ENST00000238112 PAWRQ96IZ0 340 aaKnown RBP17.53■□□□□ 0.4
CPSF3-201ENST00000238112 HDHD5Q9BXW7 423 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms