RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 RBPJQ06330 500 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 DECR1Q16698 335 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 OR4F3Q6IEY1 312 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 PAOXQ6QHF9 649 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 BNC2Q6ZN30 1099 aaPredicted RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 MDGA2Q7Z553 956 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 SLC22A16Q86VW1 577 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 SLC44A2Q8IWA5 706 aaPredicted RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 SULF2Q8IWU5 870 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 FBXW8Q8N3Y1 598 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 NR4A3Q92570 626 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 DIO2Q92813 273 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 OMA1Q96E52 524 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 RILPQ96NA2 401 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 OR52B2Q96RD2 323 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 BARD1Q99728 777 aaKnown RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 LMF2Q9BU23 707 aaKnown RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 RMND5AQ9H871 391 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 SDR39U1Q9NRG7 319 aaPredicted RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 ZCCHC3Q9NUD5 404 aaKnown RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 ASF1BQ9NVP2 202 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 ERRFI1Q9UJM3 462 aaPredicted RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 BOKQ9UMX3 212 aaPredicted RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 FAF1Q9UNN5 650 aaPredicted RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 CROCCQ5TZA2 2017 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 OR6C70A6NIJ9 312 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 DUXAA6NLW8 204 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 ANKRD28O15084 1053 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 PGRP06401 933 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 ABCB1P08183 1280 aaPredicted RBP10.37□□□□□ -0.75
SF3B6-201ENST00000233468 ALOX5P09917 674 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 CT45A8P0DMV1 189 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 CT45A9P0DMV2 189 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 SOAT1P35610 550 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 MDH1P40925 334 aaKnown RBP10.37□□□□□ -0.75
SF3B6-201ENST00000233468 MRPL19P49406 292 aaKnown RBP10.37□□□□□ -0.75
SF3B6-201ENST00000233468 ST13P50502 369 aaKnown RBP10.37□□□□□ -0.75
SF3B6-201ENST00000233468 CDK9P50750 372 aaKnown RBP10.37□□□□□ -0.75
SF3B6-201ENST00000233468 ANXA11P50995 505 aaKnown RBP10.37□□□□□ -0.75
SF3B6-201ENST00000233468 PNLIPRP2P54317 469 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 NME5P56597 212 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 UFM1P61960 85 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 KCNJ2P63252 427 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 TXNL4AP83876 142 aaKnown RBP10.37□□□□□ -0.75
SF3B6-201ENST00000233468 DUSP8Q13202 625 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 SNTA1Q13424 505 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 NNATQ16517 81 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 FAM174BQ3ZCQ3 159 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 CT45A2Q5DJT8 189 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 SPANXN4Q5MJ08 99 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 METTL21CQ5VZV1 264 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 TMEM198Q66K66 360 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 SLC30A6Q6NXT4 461 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 TMEM81Q6P7N7 255 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 MSANTD1Q6ZTZ1 278 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 MAVSQ7Z434 540 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 ZNF227Q86WZ6 799 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 ZFP62Q8NB50 900 aaPredicted RBP10.37□□□□□ -0.75
SF3B6-201ENST00000233468 ST6GALNAC3Q8NDV1 305 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 OR10G3Q8NGC4 313 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 OR4A15Q8NGL6 344 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 OR5M3Q8NGP4 307 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 SPPL2AQ8TCT8 520 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 GPR151Q8TDV0 419 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 SLC9A6Q92581 669 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 TMBIM1Q969X1 311 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 FAM120BQ96EK7 910 aaKnown RBP10.37□□□□□ -0.75
SF3B6-201ENST00000233468 CHMP6Q96FZ7 201 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 SLC35A4Q96G79 324 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 COL21A1Q96P44 957 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 OR52E6Q96RD3 313 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 TAAR6Q96RI8 345 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 TEP1Q99973 2627 aaKnown RBP10.37□□□□□ -0.75
SF3B6-201ENST00000233468 DOHHQ9BU89 302 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 HES7Q9BYE0 225 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 CCDC134Q9H6E4 229 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 METTL7AQ9H8H3 244 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 ANKRA2Q9H9E1 313 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 GIN1Q9NXP7 522 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 B4GALT7Q9UBV7 327 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 BTNL2Q9UIR0 455 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 CBLCQ9ULV8 474 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 DTX4Q9Y2E6 619 aa10.37□□□□□ -0.75
SF3B6-201ENST00000233468 A0A0G2JND7 137 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 FAM234BA2RU67 622 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 TFECO14948 347 aaPredicted RBP10.36□□□□□ -0.75
SF3B6-201ENST00000233468 ZNF354AO60765 605 aaPredicted RBP10.36□□□□□ -0.75
SF3B6-201ENST00000233468 CPSF4O95639 269 aaKnown RBP10.36□□□□□ -0.75
SF3B6-201ENST00000233468 AGR2O95994 175 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 CCL3P10147 92 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 UQCRC2P22695 453 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 LCN1P31025 176 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 GABRA3P34903 492 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 SOX18P35713 384 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 MASP1P48740 699 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 ATP4BP51164 291 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 POLR2JP52435 117 aaKnown RBP10.36□□□□□ -0.75
SF3B6-201ENST00000233468 CORO7P57737 925 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 FBXW4P57775 412 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms