RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CBLCQ9ULV8 474 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 BOKQ9UMX3 212 aaPredicted RBP11.62□□□□□ -0.55
LSM5-201ENST00000223084 MED12Q93074 2177 aa11.62□□□□□ -0.55
LSM5-201ENST00000223084 ICE1Q9Y2F5 2266 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 ANKRD33BA6NCL7 494 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 OR6C70A6NIJ9 312 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 GNB5O14775 395 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 LRRTM2O43300 516 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 SLC19A2O60779 497 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 TRIM3O75382 744 aaPredicted RBP11.61□□□□□ -0.55
LSM5-201ENST00000223084 ACP2P11117 423 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 CYP4B1P13584 511 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 IL12AP29459 219 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 IL12BP29460 328 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 KRT20P35900 424 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 RFX3P48380 749 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 HBA1P69905 142 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 RPP38P78345 283 aaKnown RBP11.61□□□□□ -0.55
LSM5-201ENST00000223084 RBPJQ06330 500 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 ZNHIT3Q15649 155 aaPredicted RBP11.61□□□□□ -0.55
LSM5-201ENST00000223084 HYAL4Q2M3T9 481 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 LSM12Q3MHD2 195 aaKnown RBP11.61□□□□□ -0.55
LSM5-201ENST00000223084 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 SPANXN4Q5MJ08 99 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 TBCELQ5QJ74 424 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 FNDC7Q5VTL7 733 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 GALNT10Q86SR1 603 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 FJX1Q86VR8 437 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 ANKRD46Q86W74 232 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 SPPL2CQ8IUH8 684 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 CLEC4FQ8N1N0 589 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 FAM109AQ8N4B1 249 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 OR5AK3PQ8NH89 298 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 CEP70Q8NHQ1 597 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 SLC9A6Q92581 669 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 NTNG2Q96CW9 530 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 SLC35A4Q96G79 324 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 MAELQ96JY0 434 aaKnown RBP11.61□□□□□ -0.55
LSM5-201ENST00000223084 ZNF597Q96LX8 424 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 GNRHR2Q96P88 292 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 Q9N2J8 555 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 ZCCHC3Q9NUD5 404 aaKnown RBP11.61□□□□□ -0.55
LSM5-201ENST00000223084 FLRT3Q9NZU0 649 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 TINAGQ9UJW2 476 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 SLC5A6Q9Y289 635 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 ZNF835Q9Y2P0 537 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 HRH3Q9Y5N1 445 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 GPR45Q9Y5Y3 372 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 COL12A1Q99715 3063 aa11.61□□□□□ -0.55
LSM5-201ENST00000223084 PRAMEF25A6NGN4 478 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 SCN2BO60939 215 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 ICOSLGO75144 302 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 SNX4O95219 450 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 CPSF4O95639 269 aaKnown RBP11.6□□□□□ -0.55
LSM5-201ENST00000223084 IGKV1D-16P01601 117 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 ABOP16442 354 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 SOAT1P35610 550 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 MAP3K8P41279 467 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 KIR3DL1P43629 444 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 MASP1P48740 699 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 CCT3P49368 545 aaKnown RBP11.6□□□□□ -0.55
LSM5-201ENST00000223084 DGKQP52824 942 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 CLNS1AP54105 237 aaKnown RBP11.6□□□□□ -0.55
LSM5-201ENST00000223084 PNLIPRP2P54317 469 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 PRR5P85299 388 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 LASP1Q14847 261 aaKnown RBP11.6□□□□□ -0.55
LSM5-201ENST00000223084 DUSP5Q16690 384 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 FAM174BQ3ZCQ3 159 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 SPDYE7PQ495Y7 208 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 CYP27C1Q4G0S4 372 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 MFSD12Q6NUT3 480 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 EPGNQ6UW88 154 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 ANGPTL8Q6UXH0 198 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 BNC2Q6ZN30 1099 aaPredicted RBP11.6□□□□□ -0.55
LSM5-201ENST00000223084 RGS9BPQ6ZS82 235 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 PACS2Q86VP3 889 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 NATD1Q8N6N6 113 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 CDRT4Q8N9R6 151 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 SLC16A11Q8NCK7 471 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 OR4A15Q8NGL6 344 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 PSMA8Q8TAA3 256 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 GPR151Q8TDV0 419 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 ACTRT2Q8TDY3 377 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 HOXB13Q92826 284 aaPredicted RBP11.6□□□□□ -0.55
LSM5-201ENST00000223084 TESCQ96BS2 214 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 TMCO6Q96DC7 493 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 THOC1Q96FV9 657 aaKnown RBP11.6□□□□□ -0.55
LSM5-201ENST00000223084 RMND5BQ96G75 393 aaPredicted RBP11.6□□□□□ -0.55
LSM5-201ENST00000223084 MAGEB18Q96M61 343 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 EBF4Q9BQW3 602 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 OSBPL11Q9BXB4 747 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 ZNF703Q9H7S9 590 aaPredicted RBP11.6□□□□□ -0.55
LSM5-201ENST00000223084 KLRF1Q9NZS2 232 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 TNFRSF10DQ9UBN6 386 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 MAPRE3Q9UPY8 281 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 PCNX3Q9H6A9 2034 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 PTPN13Q12923 2485 aa11.6□□□□□ -0.55
LSM5-201ENST00000223084 SPTBN1Q01082 2364 aaKnown RBP11.6□□□□□ -0.55
LSM5-201ENST00000223084 C17orf51A8MQB3 221 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 RNASET2O00584 256 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms