RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 CNOT11Q9UKZ1 510 aaKnown RBP13.5□□□□□ -0.25
PCOLCE-201ENST00000223061 RNF103-CHMP3A0A140T963 221 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 GXYLT2A0PJZ3 443 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 HMGN2P05204 90 aaKnown RBP13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 ACP2P11117 423 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 PRIM2P49643 509 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 PSPHP78330 225 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 RPP38P78345 283 aaKnown RBP13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 VPS26BQ4G0F5 336 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 RNFT1Q5M7Z0 435 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 ZNF324BQ6AW86 544 aaPredicted RBP13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 GK5Q6ZS86 529 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 TRPM8Q7Z2W7 1104 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 NUP54Q7Z3B4 507 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 POGLUT1Q8NBL1 392 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 SLC16A11Q8NCK7 471 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 SFXN5Q8TD22 340 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 HGDQ93099 445 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 RMND5BQ96G75 393 aaPredicted RBP13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 JSRP1Q96MG2 331 aaPredicted RBP13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 NODALQ96S42 347 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 SLX1AQ9BQ83 275 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 SIKE1Q9BRV8 207 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 DOHHQ9BU89 302 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 TMEM120AQ9BXJ8 343 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 TUBA8Q9NY65 449 aaPredicted RBP13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 CBLCQ9ULV8 474 aa13.49□□□□□ -0.25
PCOLCE-201ENST00000223061 OR6C70A6NIJ9 312 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 FAM166BA8MTA8 275 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 NPIPA5E9PKD4 350 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 TSPAN2O60636 221 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 WISP2O76076 250 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 IL6P05231 212 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 ALOX5P09917 674 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 NCF2P19878 526 aaPredicted RBP13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 GNLYP22749 145 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 POLR2JP52435 117 aaKnown RBP13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 MRPL49Q13405 166 aaKnown RBP13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 DUSP5Q16690 384 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 DECR1Q16698 335 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 CYP27C1Q4G0S4 372 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 TIGD2Q4W5G0 525 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 CGB2Q6NT52 195 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 ZFP62Q8NB50 900 aaPredicted RBP13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 GALNT11Q8NCW6 608 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 MOAP1Q96BY2 351 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 PANX1Q96RD7 426 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 INPP5KQ9BT40 448 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 METTL7AQ9H8H3 244 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 GPATCH2Q9NW75 528 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 BTNL2Q9UIR0 455 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 NPIPA1Q9UND3 350 aa13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 FAF1Q9UNN5 650 aaPredicted RBP13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.48□□□□□ -0.25
PCOLCE-201ENST00000223061 FAM234BA2RU67 622 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 TTC36A6NLP5 189 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 TFECO14948 347 aaPredicted RBP13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 NKX2-2O95096 273 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 CASP3P42574 277 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 ZFP36L2P47974 494 aaKnown RBP13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 UQCRFS1P47985 274 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 RPS26P62854 115 aaKnown RBP13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 ZCCHC12Q6PEW1 402 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 BHLHB9Q6PI77 547 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 GALNT10Q86SR1 603 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 COX18Q8N8Q8 333 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 STON2Q8WXE9 905 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 HOXB13Q92826 284 aaPredicted RBP13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 VPS33AQ96AX1 596 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 SLC35A4Q96G79 324 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 SECISBP2Q96T21 854 aaKnown RBP13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 ACTRT3Q9BYD9 372 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 TTTY12Q9BZ98 90 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 PROK2Q9HC23 129 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 KLRF1Q9NZS2 232 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 NR5A2O00482 541 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 HS6ST1O60243 411 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 ABCB7O75027 752 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 DNAJC8O75937 253 aaPredicted RBP13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 KCNH1O95259 989 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 GSNP06396 782 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 CYP4B1P13584 511 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 EDN3P14138 238 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 MAP3K8P41279 467 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 CDKN2CP42773 168 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 TDGF1P3P51864 188 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 CASP9P55211 416 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 PPIAP62937 165 aaKnown RBP13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 MRPS22P82650 360 aaKnown RBP13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 FOXO1Q12778 655 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 EFR3AQ14156 821 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 SQLEQ14534 574 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 TBCELQ5QJ74 424 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 CDC73Q6P1J9 531 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 DNAJC14Q6Y2X3 702 aaPredicted RBP13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 C6orf120Q7Z4R8 191 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 CDS1Q92903 461 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 TMCO6Q96DC7 493 aa13.47□□□□□ -0.25
PCOLCE-201ENST00000223061 ANGPTL4Q9BY76 406 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms