RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 USP39Q53GS9 565 aaKnown RBP12.86□□□□□ -0.35
GABPB1-201ENST00000220429 GOLGA7Q7Z5G4 137 aa12.86□□□□□ -0.35
GABPB1-201ENST00000220429 OR4N4Q8N0Y3 316 aa12.86□□□□□ -0.35
GABPB1-201ENST00000220429 AP3S1Q92572 193 aa12.86□□□□□ -0.35
GABPB1-201ENST00000220429 COMMD3Q9UBI1 195 aa12.86□□□□□ -0.35
GABPB1-201ENST00000220429 MYO7AQ13402 2215 aa12.86□□□□□ -0.35
GABPB1-201ENST00000220429 NPIPB15A6NHN6 443 aaPredicted RBP12.85□□□□□ -0.35
GABPB1-201ENST00000220429 LEFTY2O00292 366 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 FFAR2O15552 330 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 LRG1P02750 347 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 ADRA2AP08913 450 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 MAPK8P45983 427 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 EPHA4P54764 986 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 C6orf136Q5SQH8 315 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 FAHD1Q6P587 224 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 IKBIPQ70UQ0 350 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 OR2AP1Q8NGE2 309 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 LMLNQ96KR4 655 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 GABARAPL3Q9BY60 117 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 NSUN3Q9H649 340 aaKnown RBP12.85□□□□□ -0.35
GABPB1-201ENST00000220429 ELOVL2Q9NXB9 296 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 MS4A12Q9NXJ0 267 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 MRTO4Q9UKD2 239 aaKnown RBP12.85□□□□□ -0.35
GABPB1-201ENST00000220429 HCN2Q9UL51 889 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 AP1M2Q9Y6Q5 423 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 MTCL1Q9Y4B5 1905 aaKnown RBP12.85□□□□□ -0.35
GABPB1-201ENST00000220429 L7N2F9 121 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 DIRAS1O95057 198 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 CTSAP10619 480 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 GABRB1P18505 474 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 ITPKAP23677 461 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 MMP12P39900 470 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 IDH2P48735 452 aaKnown RBP12.85□□□□□ -0.35
GABPB1-201ENST00000220429 GTF2H2Q13888 395 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 ARHGAP15Q53QZ3 475 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 PDE12Q6L8Q7 609 aaKnown RBP12.85□□□□□ -0.35
GABPB1-201ENST00000220429 GTF2H2CQ6P1K8 395 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 PDZD3Q86UT5 571 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 CMTM8Q8IZV2 173 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 SLC43A2Q8N370 569 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 AKR7LQ8NHP1 331 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 NELL1Q92832 810 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 DMRTA2Q96SC8 542 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 C19orf43Q9BQ61 176 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 SLC46A2Q9BY10 475 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 CRLS1Q9UJA2 301 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 LAMP5Q9UJQ1 280 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 KIAA0100Q14667 2235 aaKnown RBP12.85□□□□□ -0.35
GABPB1-201ENST00000220429 CHD7Q9P2D1 2997 aa12.85□□□□□ -0.35
GABPB1-201ENST00000220429 TAPBPO15533 448 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 GUCA1CO95843 209 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 C8AP07357 584 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 ACRP10323 421 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 MUC1P15941 1255 aaPredicted RBP12.84□□□□□ -0.35
GABPB1-201ENST00000220429 SERPINA4P29622 427 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 PPM1AP35813 382 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 ECH1Q13011 328 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 GRIN2CQ14957 1233 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 SFRP5Q5T4F7 317 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 CYB5R2Q6BCY4 276 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 LILRA6Q6PI73 481 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 CBLN2Q8IUK8 224 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 OR14A16Q8NHC5 309 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 METTL6Q8TCB7 284 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 POP5Q969H6 163 aaKnown RBP12.84□□□□□ -0.35
GABPB1-201ENST00000220429 LURAP1Q96LR2 239 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 CMTM3Q96MX0 182 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 HBEGFQ99075 208 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 SPSB2Q99619 263 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 IKZF5Q9H5V7 419 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 CFAP20Q9Y6A4 193 aaKnown RBP12.84□□□□□ -0.35
GABPB1-201ENST00000220429 UBE2CO00762 179 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 CXCL2P19875 107 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 C3orf38Q5JPI3 329 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 GPRC6AQ5T6X5 926 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 CRTC1Q6UUV9 634 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 LDLRAD3Q86YD5 345 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 NANOGP1Q8N7R0 232 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 GPR26Q8NDV2 337 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 ELMOD3Q96FG2 381 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 SSX3Q99909 188 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 VRK1Q99986 396 aaPredicted RBP12.84□□□□□ -0.35
GABPB1-201ENST00000220429 GSDMCQ9BYG8 508 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 HDHD2Q9H0R4 259 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 TMEM45AQ9NWC5 275 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 ZNF226Q9NYT6 803 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 TREM2Q9NZC2 230 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 CCL26Q9Y258 94 aa12.84□□□□□ -0.35
GABPB1-201ENST00000220429 SMIM30A4D0T7 59 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 OR6C68A6NDL8 312 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 ARHGEF33A8MVX0 844 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 BNIP3LO60238 219 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 ZNF8P17098 575 aaPredicted RBP12.83□□□□□ -0.35
GABPB1-201ENST00000220429 DDX6P26196 483 aaKnown RBP eCLIP12.83□□□□□ -0.356e-6■■■■□ 19.3
GABPB1-201ENST00000220429 CD79BP40259 229 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms