RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CRABP1P29762 137 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 NOVP48745 357 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 NPRL3Q12980 569 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 COQ5Q5HYK3 327 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 HACD2Q6Y1H2 254 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 ZNF619Q8N2I2 560 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 ACOT4Q8N9L9 421 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 ZNF226Q9NYT6 803 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 ABCG2Q9UNQ0 655 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 A6NIZ1 184 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 H3BSA7 217 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 RAP1BP61224 184 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 RAP1AP62834 184 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 MAB21L1Q13394 359 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 KDELC1Q6UW63 502 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 PDSS2Q86YH6 399 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 RNF38Q9H0F5 515 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 NAALAD2Q9Y3Q0 740 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 ZCWPW2A0A1B0GU75 182 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 SNAP29O95721 258 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 CDNFQ49AH0 187 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 HHIPL1Q96JK4 782 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 ZNF334Q9HCZ1 680 aaPredicted RBP17.93■□□□□ 0.46
SMPD3-201ENST00000219334 UQCRC1P31930 480 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 DAP3P51398 398 aaKnown RBP17.93■□□□□ 0.46
SMPD3-201ENST00000219334 TMEM184AQ6ZMB5 413 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 MRPL21Q7Z2W9 205 aaKnown RBP17.93■□□□□ 0.46
SMPD3-201ENST00000219334 TREM1Q9NP99 234 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 TAAR2Q9P1P5 351 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 SIGLEC1Q9BZZ2 1709 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 ZFAND5O76080 213 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 CD46P15529 392 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 DDCP20711 480 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 YPEL5P62699 121 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 AIMP2Q13155 320 aaKnown RBP17.93■□□□□ 0.46
SMPD3-201ENST00000219334 FAM76BQ5HYJ3 339 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 FAM180BQ6P0A1 224 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 METTL2BQ6P1Q9 378 aaKnown RBP17.93■□□□□ 0.46
SMPD3-201ENST00000219334 TMEM53Q6P2H8 277 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 SPAG16Q8N0X2 631 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 MDGA1Q8NFP4 955 aa17.93■□□□□ 0.46
SMPD3-201ENST00000219334 EFCAB7A8K855 629 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 TNFSF4P23510 183 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 MAGEA8P43361 318 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 GALNT1Q10472 559 aaPredicted RBP17.92■□□□□ 0.46
SMPD3-201ENST00000219334 ARL14Q8N4G2 192 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 MS4A15Q8N5U1 240 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 VN1R2Q8NFZ6 395 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 NEIL2Q969S2 332 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 AQP9O43315 295 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 CD83Q01151 205 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 OPN5Q6U736 354 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 HINT2Q9BX68 163 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 SDK1Q7Z5N4 2213 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 SMCO3A2RU48 225 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 ATG12O94817 140 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 PRKXP51817 358 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 BDH1Q02338 343 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 APOFQ13790 326 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 DCAF12Q5T6F0 453 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 NXPE3Q969Y0 559 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 RDH14Q9HBH5 336 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 RAB9BQ9NP90 201 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 A0A0U1RQS6 177 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 RASAL1O95294 804 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 RAC2P15153 192 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 ELK4P28324 431 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 ZNF252P-AS1Q0IIN9 211 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 PLBD1Q6P4A8 553 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 OR9A4Q8NGU2 314 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 CRYGNQ8WXF5 182 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 DCBLD2Q96PD2 775 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 BEX2Q9BXY8 128 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 ACTR6Q9GZN1 396 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 BEX1Q9HBH7 125 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 IGSF5Q9NSI5 407 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 POT1Q9NUX5 634 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 ENPP4Q9Y6X5 453 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 LRP6O75581 1613 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 BORCS7-ASMTA0A0B4J1R7 106 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 GNAO1P09471 354 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 C6orf132Q5T0Z8 1188 aa17.92■□□□□ 0.46
SMPD3-201ENST00000219334 BLACEA4D250 179 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 SLITRK5O94991 958 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 VASPP50552 380 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-201ENST00000219334 CTSCP53634 463 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 RGNQ15493 299 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 SPHARQ15513 63 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 PGM2L1Q6PCE3 622 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 MYH2Q9UKX2 1941 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 FOXE1O00358 373 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-201ENST00000219334 CDKN2CP42773 168 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 ERVFC1P60507 584 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 C6orf141Q5SZD1 244 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 CST9Q5W186 159 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 TANGO2Q6ICL3 276 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 BAIAP2L2Q6UXY1 529 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 TRIM46Q7Z4K8 759 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 MAL2Q969L2 176 aa17.91■□□□□ 0.46
SMPD3-201ENST00000219334 CCDC86Q9H6F5 360 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms