RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 FARSAQ9Y285 508 aaKnown RBP12.97□□□□□ -0.33
SIX4-201ENST00000216513 CDK5RAP2Q96SN8 1893 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 A0A1W2PPC1 479 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 KRBA1A5PL33 1030 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 HTR3EA5X5Y0 456 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 GLB1P16278 677 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 GPR85P60893 370 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 PGBD5Q8N414 524 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 ZFP41Q8N8Y5 198 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 CALHM2Q9HA72 323 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 SMURF1Q9HCE7 757 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 TNFRSF10CO14798 259 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 SLC35E2BP0CK96 405 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 FASLGP48023 281 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 NKAIN1Q4KMZ8 207 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 ALG10BQ5I7T1 473 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 ATG9BQ674R7 924 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 GFRALQ6UXV0 394 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 MAMDC2Q7Z304 686 aaPredicted RBP12.97□□□□□ -0.33
SIX4-201ENST00000216513 ARRDC2Q8TBH0 407 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 RHBDF1Q96CC6 855 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 MS4A4EQ96PG1 132 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 SP140LQ9H930 580 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 WSB2Q9NYS7 404 aaPredicted RBP12.97□□□□□ -0.33
SIX4-201ENST00000216513 STOML2Q9UJZ1 356 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 RAD1O60671 282 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 PENKP01210 267 aaPredicted RBP12.97□□□□□ -0.33
SIX4-201ENST00000216513 ARHGDIBP52566 201 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 SLC22A16Q86VW1 577 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 CHTF18Q8WVB6 975 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 SGTBQ96EQ0 304 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 ZNF878C9JN71 531 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 UBL4AP11441 157 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 AKR1D1P51857 326 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 PRDX1Q06830 199 aaKnown RBP12.97□□□□□ -0.33
SIX4-201ENST00000216513 SPIN3Q5JUX0 258 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 ZZZ3Q8IYH5 903 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 PSD4Q8NDX1 1056 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 TAAR9Q96RI9 348 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 FN3KQ9H479 309 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 MRPL15Q9P015 296 aaKnown RBP12.97□□□□□ -0.33
SIX4-201ENST00000216513 PCDHGB1Q9Y5G3 927 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 RAP2AP10114 183 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 PSMA1P25786 263 aaKnown RBP12.96□□□□□ -0.33
SIX4-201ENST00000216513 SMSP52788 366 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 TMEM53Q6P2H8 277 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 TMEM64Q6YI46 380 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 TMEM135Q86UB9 458 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 LAPTM4BQ86VI4 370 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 TESCQ96BS2 214 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 TRPV5Q9NQA5 729 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 MBD2Q9UBB5 411 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 BCORQ6W2J9 1755 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 ZSCAN5BA6NJL1 495 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 ANHXE9PGG2 379 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 ZNF35P13682 527 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 PRKCAP17252 672 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 TGFBR2P37173 567 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 PGFP49763 221 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 GSK3BP49841 420 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 IQCCQ4KMZ1 466 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 LACTB2Q53H82 288 aaPredicted RBP12.96□□□□□ -0.33
SIX4-201ENST00000216513 ZNF597Q96LX8 424 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 OR4K3Q96R72 315 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 UCK2Q9BZX2 261 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 ETAA1Q9NY74 926 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 TNFRSF10DQ9UBN6 386 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 OR5K3A6NET4 321 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 EIF3FO00303 357 aaPredicted RBP12.96□□□□□ -0.33
SIX4-201ENST00000216513 CD83Q01151 205 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 NADK2Q4G0N4 442 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 GUSBP11Q6P575 273 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 VASH2Q86V25 355 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 MFSD9Q8NBP5 474 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 PIK3R3Q92569 461 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 DGCR14Q96DF8 476 aaKnown RBP12.96□□□□□ -0.33
SIX4-201ENST00000216513 C12orf49Q9H741 205 aa12.96□□□□□ -0.33
SIX4-201ENST00000216513 AOAHP28039 575 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 TAP2Q03519 686 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 UGT3A2Q3SY77 523 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 ZNF687Q8N1G0 1237 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 FOLH1BQ9HBA9 442 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 TMPRSS11EQ9UL52 423 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 M0R129 80 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 GPIP06744 558 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 RPS26P11Q5JNZ5 115 aaPredicted RBP12.96□□□□□ -0.34
SIX4-201ENST00000216513 SHQ1Q6PI26 577 aaKnown RBP12.96□□□□□ -0.34
SIX4-201ENST00000216513 CLECL1Q8IZS7 167 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 C8orf44Q96CB5 159 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 CPNE2Q96FN4 548 aaPredicted RBP12.96□□□□□ -0.34
SIX4-201ENST00000216513 ZNF559Q9BR84 538 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 IL21Q9HBE4 155 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 ZNF224Q9NZL3 707 aa12.96□□□□□ -0.34
SIX4-201ENST00000216513 MEN1O00255 615 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 SLC30A4O14863 429 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 MRPL33O75394 65 aaKnown RBP12.95□□□□□ -0.34
SIX4-201ENST00000216513 GATBO75879 557 aaKnown RBP12.95□□□□□ -0.34
SIX4-201ENST00000216513 ADH7P40394 386 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms