RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 PCDH7O60245 1069 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 DLX3O60479 287 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 NME6O75414 186 aaPredicted RBP13.65□□□□□ -0.22
UPK3A-201ENST00000216211 ACTL6AO96019 429 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 HSD3B1P14060 373 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 DRD5P21918 477 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 CTSSP25774 331 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 HSD3B2P26439 372 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 HMOX2P30519 316 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 ETV4P43268 484 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 DMTNQ08495 405 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 SNTA1Q13424 505 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF628Q5EBL2 1059 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 GPRIN3Q6ZVF9 776 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 WDSUB1Q8N9V3 476 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 OR14L1PQ8NHC6 308 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 METTL6Q8TCB7 284 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF675Q8TD23 568 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 FAM222BQ8WU58 562 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 NINJ1Q92982 152 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 TMBIM1Q969X1 311 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 APIPQ96GX9 242 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF382Q96SR6 550 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 ACPTQ9BZG2 426 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 CALHM2Q9HA72 323 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 ST6GALNAC2Q9UJ37 374 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 EXO1Q9UQ84 846 aaKnown RBP13.65□□□□□ -0.22
UPK3A-201ENST00000216211 GPR55Q9Y2T6 319 aaPredicted RBP13.65□□□□□ -0.22
UPK3A-201ENST00000216211 GNG14A0A1W2PPG7 69 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 EEF1E1-BLOC1S5C9J1V9 151 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 TO15178 435 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 EEF1E1O43324 174 aaKnown RBP13.64□□□□□ -0.23
UPK3A-201ENST00000216211 ULK1O75385 1050 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 REM1O75628 298 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 CBR3O75828 277 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 BCAS2O75934 225 aaPredicted RBP13.64□□□□□ -0.23
UPK3A-201ENST00000216211 CYP4B1P13584 511 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 IMPDH1P20839 514 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 CCT5P48643 541 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 HMGCS1Q01581 520 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 SRYQ05066 204 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 RCAN2Q14206 197 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 PLXDC2Q6UX71 529 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 CDC20BQ86Y33 519 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 LRRC34Q8IZ02 419 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 OR9A2Q8NGT5 310 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 GOT1L1Q8NHS2 421 aaPredicted RBP13.64□□□□□ -0.23
UPK3A-201ENST00000216211 ZPLD1Q8TCW7 415 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 TMCO6Q96DC7 493 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 RMND5BQ96G75 393 aaPredicted RBP13.64□□□□□ -0.23
UPK3A-201ENST00000216211 COL21A1Q96P44 957 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 FOXC2Q99958 501 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 TUBA1CQ9BQE3 449 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 EBPLQ9BY08 206 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 OR2B2Q9GZK3 357 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 SLC17A7Q9P2U7 560 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 DCDC2Q9UHG0 476 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 FOXD3Q9UJU5 478 aaPredicted RBP13.64□□□□□ -0.23
UPK3A-201ENST00000216211 PLEKHA6Q9Y2H5 1048 aa13.64□□□□□ -0.23
UPK3A-201ENST00000216211 OR6C70A6NIJ9 312 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 H0Y3Z8 333 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 TSPAN2O60636 221 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 DIAPH2O60879 1101 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 VIMP08670 466 aaKnown RBP13.63□□□□□ -0.23
UPK3A-201ENST00000216211 TMIGD3P0DMS9 266 aaPredicted RBP13.63□□□□□ -0.23
UPK3A-201ENST00000216211 CT45A8P0DMV1 189 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 CT45A9P0DMV2 189 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 DRD2P14416 443 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 CPN1P15169 458 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 ATP5F1P24539 256 aaPredicted RBP13.63□□□□□ -0.23
UPK3A-201ENST00000216211 OPRM1P35372 400 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 GCKP35557 465 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 CORO7P57737 925 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 BTKQ06187 659 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 FOXF2Q12947 444 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 CEBPEQ15744 281 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 ZSCAN26Q16670 478 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 SPIN4Q56A73 249 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 CT45A2Q5DJT8 189 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 SCIMPQ6UWF3 145 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 NPSR1Q6W5P4 371 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 CPLX4Q7Z7G2 160 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 TRIM42Q8IWZ5 723 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 LINC01560Q8TB33 94 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 C16orf78Q8WTQ4 265 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 BTBD9Q96Q07 612 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 KCNA7Q96RP8 456 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 ADOQ96SZ5 270 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 PAIP2Q9BPZ3 127 aaKnown RBP13.63□□□□□ -0.23
UPK3A-201ENST00000216211 IQCGQ9H095 443 aaKnown RBP13.63□□□□□ -0.23
UPK3A-201ENST00000216211 NSRP1Q9H0G5 558 aaKnown RBP13.63□□□□□ -0.23
UPK3A-201ENST00000216211 CXXC4Q9H2H0 198 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 RABEP2Q9H5N1 569 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 FOLH1BQ9HBA9 442 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 FBXL2Q9UKC9 423 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 GRID1Q9ULK0 1009 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 TIMM22Q9Y584 194 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 WIF1Q9Y5W5 379 aa13.63□□□□□ -0.23
UPK3A-201ENST00000216211 MTORP42345 2549 aa13.62□□□□□ -0.23
UPK3A-201ENST00000216211 TUBAL3A6NHL2 446 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms