RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 RAB15P59190 212 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 TRA2BP62995 288 aaKnown RBP12.35□□□□□ -0.43
HDAC7-201ENST00000080059 YBX1P67809 324 aaKnown RBP12.35□□□□□ -0.43
HDAC7-201ENST00000080059 TIAL1Q01085 375 aaKnown RBP eCLIP12.35□□□□□ -0.43
HDAC7-201ENST00000080059 GRM7Q14831 915 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 KIR2DS5Q14953 304 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 BICRALQ6AI39 1079 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 FAM111BQ6SJ93 734 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 WDR20Q8TBZ3 569 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 CLEC4MQ9H2X3 399 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-201ENST00000080059 EXO5Q9H790 373 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 SLC6A13Q9NSD5 602 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 ING3Q9NXR8 418 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 OBP2AQ9NY56 170 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 KLRF1Q9NZS2 232 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 USP36Q9P275 1121 aaKnown RBP12.35□□□□□ -0.43
HDAC7-201ENST00000080059 TBC1D29Q9UFV1 150 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 ZNF221Q9UK13 617 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 GPC6Q9Y625 555 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-201ENST00000080059 PLXNA1Q9UIW2 1896 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 MAGEB3O15480 346 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 GASTP01350 101 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 SMIM18P0DKX4 95 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 CHMP24386 653 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 PCSK6P29122 969 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 ACVR1BP36896 505 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 RHAGQ02094 409 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 KLHL24Q6TFL4 600 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 SPRED2Q7Z698 418 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 CPOQ8IVL8 374 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 ANKK1Q8NFD2 765 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 HSPA12BQ96MM6 686 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 ZNF576Q9H609 170 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 SRA1Q9HD15 236 aaKnown RBP12.35□□□□□ -0.43
HDAC7-201ENST00000080059 RLIMQ9NVW2 624 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 SPHK1Q9NYA1 384 aa12.35□□□□□ -0.43
HDAC7-201ENST00000080059 SOX1O00570 391 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-201ENST00000080059 ITGAMP11215 1152 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 GP1BBP13224 206 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 ZNF24P17028 368 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 CA5AP35218 305 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 GIPRP48546 466 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 ADPRHP54922 357 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 PHC1P78364 1004 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 GPR18Q14330 331 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 MCATQ8IVS2 390 aaKnown RBP12.34□□□□□ -0.43
HDAC7-201ENST00000080059 KLHDC8BQ8IXV7 354 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 PSD4Q8NDX1 1056 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 OR4K13Q8NH42 304 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 FNDC8Q8TC99 324 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 TRUB1Q8WWH5 349 aaKnown RBP12.34□□□□□ -0.43
HDAC7-201ENST00000080059 PATE1Q8WXA2 126 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 NIPSNAP1Q9BPW8 284 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 PRR14Q9BWN1 585 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 MBD1Q9UIS9 605 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-201ENST00000080059 ZFR2Q9UPR6 939 aaKnown RBP12.34□□□□□ -0.43
HDAC7-201ENST00000080059 RBBP6Q7Z6E9 1792 aaKnown RBP12.34□□□□□ -0.43
HDAC7-201ENST00000080059 ASPDHA6ND91 283 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 FAM183AA6NL82 134 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 AHSA1O95433 338 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 AK1P00568 194 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 BCL6P41182 706 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 CXCR4P61073 352 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 HTRA4P83105 476 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-201ENST00000080059 REEP5Q00765 189 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 GFOD2Q3B7J2 385 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 YIPF7Q8N8F6 280 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 DTX3Q8N9I9 347 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 PINK1Q9BXM7 581 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 AMBRA1Q9C0C7 1298 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 SPNS1Q9H2V7 528 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 ACOT13Q9NPJ3 140 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 DUX1O43812 170 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 OR2B6P58173 313 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 OC90Q02509 493 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-201ENST00000080059 PIP5KL1Q5T9C9 394 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 PLAG1Q6DJT9 500 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 ABHD17CQ6PCB6 329 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 GID4Q8IVV7 300 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 COQ8BQ96D53 544 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 PRRC1Q96M27 445 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 AMDHD1Q96NU7 426 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 GPER1Q99527 375 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 C19orf43Q9BQ61 176 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 POLDIP3Q9BY77 421 aaKnown RBP12.34□□□□□ -0.43
HDAC7-201ENST00000080059 GRHPRQ9UBQ7 328 aa12.34□□□□□ -0.43
HDAC7-201ENST00000080059 PCM1Q15154 2024 aa12.33□□□□□ -0.43
HDAC7-201ENST00000080059 HYKKA2RU49 373 aa12.33□□□□□ -0.43
HDAC7-201ENST00000080059 KRBA1A5PL33 1030 aa12.33□□□□□ -0.43
HDAC7-201ENST00000080059 FAM221BA6H8Z2 402 aa12.33□□□□□ -0.43
HDAC7-201ENST00000080059 WASHC1A8K0Z3 465 aa12.33□□□□□ -0.43
HDAC7-201ENST00000080059 GAPDHSO14556 408 aaPredicted RBP12.33□□□□□ -0.43
HDAC7-201ENST00000080059 CASC3O15234 703 aaKnown RBP12.33□□□□□ -0.43
HDAC7-201ENST00000080059 PPM1DO15297 605 aa12.33□□□□□ -0.43
HDAC7-201ENST00000080059 LINC01565O15544 149 aa12.33□□□□□ -0.43
HDAC7-201ENST00000080059 TMPRSS11DO60235 418 aa12.33□□□□□ -0.43
HDAC7-201ENST00000080059 LCMT2O60294 686 aaKnown RBP12.33□□□□□ -0.43
HDAC7-201ENST00000080059 KLK3P07288 261 aaPredicted RBP12.33□□□□□ -0.43
HDAC7-201ENST00000080059 TACSTD2P09758 323 aa12.33□□□□□ -0.43
HDAC7-201ENST00000080059 EIF2DP41214 584 aaKnown RBP12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms