RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 WDR26Q9H7D7 661 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 STUB1Q9UNE7 303 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 TVP23AA6NH52 213 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 TARM1B6A8C7 271 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 RTCAO00442 366 aaKnown RBP11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 PCDHGA12O60330 932 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 SIX6O95475 246 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 APODP05090 189 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 ALPPL2P10696 532 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 ARSBP15848 533 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 OPCMLQ14982 345 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 MANEALQ5VSG8 457 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 LHFPL3Q86UP9 236 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 TMEM25Q86YD3 366 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 DCUN1D3Q8IWE4 304 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 CBARPQ8N350 705 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 OR4C6Q8NH72 309 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 FIBINQ8TAL6 211 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 PDLIM5Q96HC4 596 aaKnown RBP11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 IL17FQ96PD4 163 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 TSSK6Q9BXA6 273 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 C11orf54Q9H0W9 315 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 ABCD2Q9UBJ2 740 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 DUXAA6NLW8 204 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 RFXAPO00287 272 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 SNAPC5O75971 98 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 LATS1O95835 1130 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 C8orf89P0DMQ9 161 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 ADH5P11766 374 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 GSTM3P21266 225 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 TACR1P25103 407 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 CCR7P32248 378 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 GK2Q14410 553 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 FAM180BQ6P0A1 224 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 TMCO2Q7Z6W1 182 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 RANBP3LQ86VV4 465 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 TRAM1L1Q8N609 369 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 ZNF548Q8NEK5 533 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 TTLQ8NG68 377 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 WDR48Q8TAF3 677 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 MFFQ9GZY8 342 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 ZNF175Q9Y473 711 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 NINQ8N4C6 2090 aa11.5□□□□□ -0.57
TSPAN9-201ENST00000011898 ZNF705GA8MUZ8 300 aaPredicted RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 YKT6O15498 198 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 SLC19A2O60779 497 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 CD9P21926 228 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 SOX3P41225 446 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 DYRK1AQ13627 763 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 GINS1Q14691 196 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 RNF111Q6ZNA4 994 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 KCTD9Q7L273 389 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 LAX1Q8IWV1 398 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 HERVK_113Q902F9 699 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 NKD1Q969G9 470 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 CST11Q9H112 138 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 SPHK2Q9NRA0 654 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 NUP214P35658 2090 aaPredicted RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 LRRC72A6NJI9 287 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 SCAMP2O15127 329 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 KLKB1P03952 638 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 RPS2P15880 293 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 SF3A2Q15428 464 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 GRASPQ7Z6J2 395 aaPredicted RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 GPR149Q86SP6 731 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 HDDC3Q8N4P3 179 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 RELTQ969Z4 430 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 NELL2Q99435 816 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 DPYSL5Q9BPU6 564 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 METTL17Q9H7H0 456 aaPredicted RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 RDH14Q9HBH5 336 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 MRPS33Q9Y291 106 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 F5P12259 2224 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 CIB4A0PJX0 185 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 FAM170BA6NMN3 283 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 GTPBP1O00178 669 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 CAPN5O15484 640 aaPredicted RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 TXNDC12O95881 172 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 HMGN1P05114 100 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 CRISP1P54107 249 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 TMEM240Q5SV17 173 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 COMMD6Q7Z4G1 85 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 BEST3Q8N1M1 668 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 LMLNQ96KR4 655 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 CLMPQ9H6B4 373 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 TCF7L1Q9HCS4 588 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 SDHAF2Q9NX18 166 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 KLHL21Q9UJP4 597 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 HIF3AQ9Y2N7 669 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 IGLV3-10A0A075B6K4 115 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 NDUFS4O43181 175 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 UQCRC2P22695 453 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 TUBG1P23258 451 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 G0S2P27469 103 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 GUCA1AP43080 201 aaPredicted RBP11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 GZMKP49863 264 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 CDH11P55287 796 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 CTBP2P56545 445 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 TNFRSF17Q02223 184 aa11.49□□□□□ -0.57
TSPAN9-201ENST00000011898 RGNQ15493 299 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms