RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Gm6614M0QWR8 670 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cldn4O35054 210 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 AmbnO55189 407 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Hdac2P70288 488 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 TigitP86176 249 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 D17Wsu92eQ3TT38 291 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 BC061212Q6P8K3 481 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ubtd2Q6PGH0 234 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Methig1Q76I26 264 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Znf516Q7TSH3 1157 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm10330Q8BKS1 112 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 NdnfQ8C119 568 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cacul1Q8R0X2 377 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Irf2bp1Q8R3Y8 584 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr63Q8VBW9 316 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Efcab7Q8VDY4 628 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pot1Q91WC1 640 aaKnown RBP11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ceacam20Q9D2Z1 577 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Htra1Q9R118 480 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Scn1aA2APX8 2009 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zfp993A2A8V4 313 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr1303A2AVW1 312 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zfp992B1ASD8 573 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zfp54E9PW05 585 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zfp169E9Q3R6 731 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Vmn2r9K7N6Z8 848 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Vmn2r29L7N2D4 852 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm3239L7N2D9 227 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm3033M0QWI0 180 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm3532M0QWL4 194 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Hcn1O88704 910 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cd93O89103 644 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 ApodP51910 189 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cds1P98191 461 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Dtx3lQ3UIR3 748 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ripk1Q60855 656 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ube2j2Q6P073 259 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tgm6Q8BM11 706 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 PgghgQ8BP56 690 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Plekho2Q8K124 495 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Scara5Q8K299 491 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zfp991Q8R1N3 573 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 GrifinQ9D1U0 144 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Atad5Q4QY64 1826 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 StrcQ8VIM6 1809 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr74A2BHP6 318 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zfp605E9QAH2 694 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Neu1O35657 409 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Arf3P61205 181 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Lrrn4clQ3TYX2 239 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tmem181aQ3U3W2 474 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pnpla1Q3V1D5 599 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Snrnp70Q62376 448 aaKnown RBP11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 WdcpQ6NV72 663 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Shc4Q6S5L9 626 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tas2r40Q7TQB8 319 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ubap2Q91VX2 1132 aaKnown RBP11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 St3gal4Q91Y74 333 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Mrps28Q9CY16 186 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Q9DAY5 185 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Kmt2eQ3UG20 1868 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pdia2D3Z6P0 527 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Sult2b1O35400 338 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Rnf13O54965 381 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 InhaQ04997 366 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Laptm4aQ60961 233 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Nipal3Q8BGN5 410 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 SdslQ8R238 329 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Rnase10Q9D5A9 208 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cdc40Q9DC48 579 aaKnown RBP11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 MycsQ9Z304 431 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm266A6H634 200 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Chst13D3Z6E3 336 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cyp4a31F8WGU9 509 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zfp1P08042 402 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gadd45aP48316 165 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tm9sf2P58021 662 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Rgs16P97428 201 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 2410002F23RikQ3TE80 284 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 CrxosQ3UL53 246 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Znf235Q61116 645 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pex11gQ6P6M5 241 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Prap1Q80XD8 149 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Q8BPC6 396 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Trmt6Q8CE96 497 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 HopxQ8R1H0 73 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr1346Q8VGH6 313 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr686Q8VGX3 317 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Avpr1bQ9WU02 421 aa11.23□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Smurf2A2A5Z6 748 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ephx2P34914 554 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gdf7P43029 461 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 OxtrP97926 388 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Agfg2Q80WC7 479 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cpne1Q8C166 536 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr849Q8VFF6 312 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr672Q8VG28 312 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 MvdQ99JF5 401 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gid4Q9CPY6 217 aa11.22□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pbdc1Q9D0B6 198 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms