RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Nat1P50294 290 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 S100a11P50543 98 aaKnown RBP9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Atp5j2P56135 88 aaKnown RBP9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 JrkQ60976 557 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Zfp790Q80ZX2 779 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Slc25a44Q8BGF9 314 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Slc45a1Q8BIV7 751 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Znf385bQ8BXJ8 482 aaKnown RBP9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Tmem221Q8K071 230 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Exosc5Q9CRA8 235 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Tmigd1Q9D7L8 261 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Arl6ip1Q9JKW0 203 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 AireQ9Z0E3 552 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 5430401F13RikE9Q328 175 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Fmo6J3QMN6 532 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Agtr1aP29754 359 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 WdcpQ6NV72 663 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Adam20Q7M763 760 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 CptpQ8BS40 216 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Zbtb20Q8K0L9 741 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Fbxo45Q8K3B1 286 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Tceal6Q9DB24 200 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Hao2Q9NYQ2 353 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Acss2Q9QXG4 701 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Fbxo6Q9QZN4 295 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Skint4A7TZF3 474 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Cilp2D3Z7H8 1162 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm10608E9PZ13 166 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr730E9Q8M3 318 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 5730507C01RikJ3QPX0 416 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gtpbp2Q3UJK4 602 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr885Q7TRE0 309 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 JamlQ80UL9 379 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Supv3l1Q80YD1 779 aaKnown RBP9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Rxfp3Q8BGE9 472 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Slc7a6Q8BGK6 515 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Nceh1Q8BLF1 408 aaKnown RBP9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr644Q8VH21 314 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Camk1gQ91VB2 477 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gdpd3Q99LY2 330 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Uqcc2Q9CQY6 136 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Lman2Q9DBH5 358 aaKnown RBP9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Tmem43Q9DBS1 400 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 St6galnac4Q9R2B6 360 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Lama4P97927 1816 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm13276A0A087WR18 182 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm21560D3Z7A4 205 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Dok2O70469 412 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Cyp21P03940 487 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Pin1rt1Q3ULQ2 159 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Grxcr1Q50H32 290 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr1385Q7TQT1 309 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Slc31a1Q8K211 196 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Smim14Q91VT8 99 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Rp2Q9EPK2 347 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr1164A2AVT5 326 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Arg2O08691 354 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Fpr-s1O08790 351 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Apoc3P33622 99 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 CebpgP53568 150 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Pdlim7Q3TJD7 457 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Tfap2cQ61312 449 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gas6Q61592 674 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Apex2Q68G58 516 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm10330Q8BKS1 112 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Slc26a9Q8BU91 790 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Kcnc4Q8R1C0 628 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Vmn1r84Q8R284 318 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Olfr134Q8VG95 312 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Ugt2b38Q91WH2 530 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 RTRAFQ9CQE8 244 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Hsbp1Q9CQZ1 76 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Pcbd2Q9CZL5 136 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Mrpl21Q9D1N9 209 aaKnown RBP9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Lingo1Q9D1T0 614 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Cmtm2aQ9DAR1 169 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Nfs1Q9Z1J3 459 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Trpm3Q5F4S9 1721 aa9.37□□□□□ -0.91
Syne1-201ENSMUST00000041639 Scgb2b3D2XZ38 112 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm20828J3KMI7 228 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 SrcP05480 541 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 HckP08103 524 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Il6P08505 211 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 PfkmP47857 780 aaKnown RBP9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 AbatP61922 500 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 SgcbP82349 320 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Adamts1P97857 968 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 AktipQ64362 292 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Sdc3Q64519 442 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Dctn4Q8CBY8 467 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Vmn1r33Q8R2E0 305 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Bbox1Q924Y0 387 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 NansQ99J77 359 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Gm45713A0A1B0GS68 446 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Wfdc16A2A5H4 111 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 F3P20352 294 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Dsc3P55850 896 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Ufd1P70362 307 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 EvlP70429 414 aa9.36□□□□□ -0.91
Syne1-201ENSMUST00000041639 Apoc2Q05020 97 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms