RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Snap29Q9ERB0 260 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cyp2d22Q9JKY7 500 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 IghdA0A0A6YW14 291 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Trbv20A0A0B4J1H5 111 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Amd2D3Z6H8 334 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1511E9PWU0 318 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1510E9PZZ6 318 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Amd1P0DMN7 334 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 PthlhP22858 175 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Uba1yP31254 1058 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gpr165Q3V3A3 455 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rnf215Q5SPX3 379 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Psmf1Q8BHL8 271 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 GnalQ8CGK7 381 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Otud7aQ8R554 926 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pla2g15Q8VEB4 412 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Med28Q920D3 178 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rnf144aQ925F3 292 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pdzd3Q99MJ6 498 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mrpl54Q9CPW3 135 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Prl5a1Q9JII2 230 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Avpr1bQ9WU02 421 aa9.45□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mthfd2lD3YZG8 338 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 PtprhE9Q0N2 971 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Bhlhe40O35185 411 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cd83O88324 196 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Matn4O89029 624 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 SrgnP13609 152 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ido1P28776 407 aaKnown RBP9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc9a3r1P70441 355 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rps5P97461 204 aaKnown RBP9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Glycam1Q02596 151 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sox4Q06831 440 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 ptchd1Q14B62 888 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sorbs2Q3UTJ2 1180 aaKnown RBP9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Abcg1Q64343 666 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Naa50Q6PGB6 169 aaKnown RBP9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Plekha1Q8BUL6 383 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc43a2Q8CGA3 568 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sirt5Q8K2C6 310 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr791Q8VGJ0 312 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Asb8Q91ZT9 288 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tcf7l1Q9Z1J1 584 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mbd4Q9Z2D7 554 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rpl7a-ps3A0A140T8L1 270 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gm12695A2AGB2 545 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Skint4A7TZF3 474 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 GmlE9PX31 176 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr741L7N1Y5 311 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pias3O54714 628 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 GzmcP08882 248 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 PahP16331 453 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Qsox2Q3TMX7 692 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 C130050O18RikQ497Y9 356 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gm5346Q7M766 736 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mal2Q8BI08 175 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cdkl1Q8CEQ0 352 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zbtb20Q8K0L9 741 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zfp65Q91W94 390 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zfand2bQ91X58 257 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Lrrc18Q9CQ07 262 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmem35aQ9D328 167 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ppil3Q9D6L8 161 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tex29Q9DA77 186 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Clec2iQ9WVF9 217 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cd163l1A0A1B0GSB0 991 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc25a25A2ASZ8 469 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr723E9PZU2 309 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Obox6G3X9U1 347 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr724K7N5X7 309 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn2r8L7N472 848 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tlx3O55144 291 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 HcrtO55241 130 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Nr4a2Q06219 598 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 HgfQ08048 728 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sec24aQ3U2P1 1090 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Eml4Q3UMY5 988 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Fbxo42Q6PDJ6 717 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tm7sf2Q71KT5 418 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1322Q7TQW3 310 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Avl9Q80U56 649 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Lrrn3Q8CBC6 707 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zdhhc1Q8R0N9 484 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr952Q8VFD7 314 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Camk2gQ923T9 529 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tram2Q924Z5 370 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Psg23Q9D2U0 471 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Psg21Q9DAV5 471 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Yipf7Q9JIM5 254 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 NynrinQ5DTZ0 1840 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 StrcQ8VIM6 1809 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc9a5B2RXE2 898 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cilp2D3Z7H8 1162 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cyp4a10O88833 509 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 mt-Co3P00416 261 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Csf1P07141 552 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Eci1P42125 289 aaKnown RBP9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 RoraP51448 523 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 SgcdP82347 289 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Laptm4aQ60961 233 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms