RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SLC35A5Q9BS91 424 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 CNPPD1Q9BV87 410 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 TRIM8Q9BZR9 551 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 LRMDAQ9H2I8 198 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 CXorf21Q9HAI6 301 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 ZCCHC3Q9NUD5 404 aaKnown RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 DDX18Q9NVP1 670 aaKnown RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 VAPAQ9P0L0 249 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 PTGFRNQ9P2B2 879 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 SUCOQ9UBS9 1254 aaKnown RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 ERVK-11Q9UQG0 969 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 PCDHB14Q9Y5E9 798 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 SEC16AO15027 2179 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 TNRC6AQ8NDV7 1962 aaKnown RBP8.72□□□□□ -1.01
PHGDH-228ENST00000641847 A0A087WV62 115 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 C15orf38-AP3S2A0A0A6YYH1 394 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 SAGE2PA6NJ88 616 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 HRKO00198 91 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 PLOD2O00469 737 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 GYG2O15488 501 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 EMC8O43402 210 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 SEC24DO94855 1032 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-228ENST00000641847 IGHEP01854 428 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 C1QCP02747 245 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 IFI6P09912 130 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 EDN3P14138 238 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 SLC6A2P23975 617 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 OTX2P32243 289 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 SOX18P35713 384 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 CCT3P49368 545 aaKnown RBP8.72□□□□□ -1.01
PHGDH-228ENST00000641847 RASSF2P50749 326 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 SLC7A2P52569 658 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 PRKAG1P54619 331 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 PRR5P85299 388 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 MGAT2Q10469 447 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 RAPSNQ13702 412 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 SELPLGQ14242 412 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 ZNF267Q14586 743 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-228ENST00000641847 EXOSC7Q15024 291 aaKnown RBP8.72□□□□□ -1.01
PHGDH-228ENST00000641847 RUNDC3AQ59EK9 446 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 SAXO2Q658L1 398 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 TMEM205Q6UW68 189 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 BNC2Q6ZN30 1099 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-228ENST00000641847 CPEB2Q7Z5Q1 589 aaKnown RBP8.72□□□□□ -1.01
PHGDH-228ENST00000641847 ARPINQ7Z6K5 226 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 FJX1Q86VR8 437 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 RAB43Q86YS6 212 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 DEFB107AQ8IZN7 70 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 OR2L13Q8N349 312 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 KIF2BQ8N4N8 673 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 CLEC1AQ8NC01 280 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 OR52R1Q8NGF1 315 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 OR8J3Q8NGG0 315 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 OR14A16Q8NHC5 309 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 SLC2A12Q8TD20 617 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 ZFP90Q8TF47 636 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 PTPMT1Q8WUK0 201 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-228ENST00000641847 C8orf44Q96CB5 159 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 SLC35G5Q96KT7 338 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 MS4A4EQ96PG1 132 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 HOPXQ9BPY8 73 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-228ENST00000641847 BTBD10Q9BSF8 475 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 C1orf21Q9H246 121 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 IKZF5Q9H5V7 419 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 ANKRA2Q9H9E1 313 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 C3orf14Q9HBI5 128 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 SPAG4Q9NPE6 437 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 TAS2R1Q9NYW7 299 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 ERVK-19Q9WJR5 959 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 CLCA3PQ9Y6N3 262 aa8.72□□□□□ -1.01
PHGDH-228ENST00000641847 LOC102723996A0A087X1L8 192 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 EVPLLA8MZ36 301 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 CLIC1O00299 241 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 UPK1AO00322 258 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 NME4O00746 187 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 SOCS6O14544 535 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 PCDH17O14917 1159 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 PLOD3O60568 738 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 PRAMEF2O60811 474 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 COQ9O75208 318 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 PSMG1O95456 288 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 KRT75O95678 551 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 CBX7O95931 251 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 COX6A1P12074 109 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 PPIBP23284 216 aaKnown RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 MMP11P24347 488 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 SSTR4P31391 388 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 CASP9P55211 416 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 RPS26P62854 115 aaKnown RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 MAP4K2Q12851 820 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF155Q12901 538 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 DUSP8Q13202 625 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 PCOLCEQ15113 449 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 TRMT12Q53H54 448 aaKnown RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 RABL3Q5HYI8 236 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 NANOGP8Q6NSW7 305 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 MTFR2Q6P444 385 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 BHLHB9Q6PI77 547 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 PAPD4Q6PIY7 484 aaKnown RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 IGFL3Q6UXB1 125 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms