RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PDPK1O15530 556 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 PRKNO60260 465 aaPredicted RBP6.82□□□□□ -1.32
PHGDH-225ENST00000641720 OR10H2O60403 315 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 TGDSO95455 350 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 ATP1B1P05026 303 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 SP1P08047 785 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 CT62P0C5K7 136 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 SLC35E2P0CK97 266 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 LAMP1P11279 417 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 PRPS2P11908 318 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 PCSK2P16519 638 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 DRD4P21917 467 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 IL12AP29459 219 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 CHRNB4P30926 498 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 ZFP36L2P47974 494 aaKnown RBP6.82□□□□□ -1.32
PHGDH-225ENST00000641720 GPR143P51810 404 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 CASP6P55212 293 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 CLDN8P56748 225 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 NUP107P57740 925 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 C21orf58P58505 322 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 UFM1P61960 85 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 MRPS35P82673 323 aaKnown RBP6.82□□□□□ -1.32
PHGDH-225ENST00000641720 ACTN3Q08043 901 aaPredicted RBP6.82□□□□□ -1.32
PHGDH-225ENST00000641720 MGAT2Q10469 447 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 DUSP8Q13202 625 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 MAD2L1Q13257 205 aaPredicted RBP6.82□□□□□ -1.32
PHGDH-225ENST00000641720 SERTAD2Q14140 314 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 TERF2Q15554 542 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 BTBD16Q32M84 506 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 RTL6Q6ICC9 239 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 PAMR1Q6UXH9 720 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 ACAD11Q709F0 780 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 SPATA19Q7Z5L4 167 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 TMEM200AQ86VY9 491 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 LIX1LQ8IVB5 337 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 LRRC25Q8N386 305 aaPredicted RBP6.82□□□□□ -1.32
PHGDH-225ENST00000641720 APCDD1LQ8NCL9 501 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 B3GNT7Q8NFL0 401 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 ADCY4Q8NFM4 1077 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 OR9I1Q8NGQ6 314 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 OR14A16Q8NHC5 309 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 C16orf52Q8NHV5 167 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 SLC2A12Q8TD20 617 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 STON2Q8WXE9 905 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 NCLNQ969V3 563 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 PPCDCQ96CD2 204 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF764Q96H86 408 aaPredicted RBP6.82□□□□□ -1.32
PHGDH-225ENST00000641720 VPS50Q96JG6 964 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 AMDHD1Q96NU7 426 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 DGAT2Q96PD7 388 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 CCDC28BQ9BUN5 200 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 BRINP2Q9C0B6 783 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 OR8D2Q9GZM6 311 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 RABEP2Q9H5N1 569 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF385DQ9H6B1 395 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 ANKRA2Q9H9E1 313 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 CXorf21Q9HAI6 301 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 SLC35C2Q9NQQ7 365 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 KLHL1Q9NR64 748 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 RASSF1Q9NS23 344 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 ANKRD10Q9NXR5 420 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 DNAJB12Q9NXW2 375 aaKnown RBP6.82□□□□□ -1.32
PHGDH-225ENST00000641720 TAS2R7Q9NYW3 318 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 MAT2BQ9NZL9 334 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 LRFN1Q9P244 771 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 ATP6V1HQ9UI12 483 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 PPIEQ9UNP9 301 aaKnown RBP6.82□□□□□ -1.32
PHGDH-225ENST00000641720 WBP11Q9Y2W2 641 aaKnown RBP6.82□□□□□ -1.32
PHGDH-225ENST00000641720 FAM215AQ9Y5M1 114 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 TRBV11-1A0A0K0K1C0 115 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 A0A1B0GTH9 108 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 POM121CA8CG34 1229 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 GABRR3A8MPY1 467 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 TBX19O60806 448 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 NME6O75414 186 aaPredicted RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 ATE1O95260 518 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 CBX7O95931 251 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 IGKV3-11P04433 115 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 HEXAP06865 529 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 TROVE2P10155 538 aaKnown RBP eCLIP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 COX7A2P14406 83 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 IDO1P14902 403 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 PORP16435 677 aaPredicted RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 ABOP16442 354 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 CSNK2A2P19784 350 aaPredicted RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 PRPS1L1P21108 318 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 S1PR1P21453 382 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 NT5EP21589 574 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 NTSP30990 170 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 SSTR4P31391 388 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 MC3RP41968 323 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 CDK9P50750 372 aaKnown RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 NCBP2P52298 156 aaKnown RBP eCLIP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 DGKQP52824 942 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 WNT3P56703 355 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 PHC1P78364 1004 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 HSPB3Q12988 150 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 EXOSC7Q15024 291 aaKnown RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 EXT1Q16394 746 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 SPRED3Q2MJR0 410 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms