RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CAMK2DQ13557 499 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 ANGPT1Q15389 498 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 C6orf132Q5T0Z8 1188 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 METTL2BQ6P1Q9 378 aaKnown RBP12.97□□□□□ -0.33
SCARB2-227ENST00000640957 GDPGP1Q6ZNW5 385 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 Q6ZTK2 550 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 RELL2Q8NC24 303 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-227ENST00000640957 OR4K5Q8NGD3 323 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 OR8K5Q8NH50 307 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 GSDMCQ9BYG8 508 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 BRD9Q9H8M2 597 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 THSD1Q9NS62 852 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 TDP1Q9NUW8 608 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 CHST2Q9Y4C5 530 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SIRT4Q9Y6E7 314 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-227ENST00000640957 CNTRLQ7Z7A1 2325 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 GLOD5A6NK44 160 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 ANHXE9PGG2 379 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 H3BNC9 293 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 MPZL2O60487 215 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 MTNR1AP48039 350 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 WDR5P61964 334 aaKnown RBP12.96□□□□□ -0.33
SCARB2-227ENST00000640957 GPR17Q13304 367 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 DSG2Q14126 1118 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 FCRLBQ6BAA4 426 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 QSOX2Q6ZRP7 698 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 COMMD6Q7Z4G1 85 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 CACUL1Q86Y37 369 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 NEIL2Q969S2 332 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 CXorf36Q9H7Y0 433 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 WASH6PQ9NQA3 447 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 MIEF1Q9NQG6 463 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 SEC14L3Q9UDX4 400 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 BAIAP2Q9UQB8 552 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 MAB21L2Q9Y586 359 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 SZT2Q5T011 3432 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 ATG13O75143 517 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 STC2O76061 302 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 EGFP01133 1207 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 BTCP35070 178 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 DSTNP60981 165 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 HSF2Q03933 536 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 SREBF2Q12772 1141 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 TRIM40Q6P9F5 258 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 CERS6Q6ZMG9 384 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 TOMM5Q8N4H5 51 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 FOPNLQ96NB1 174 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 FAIM2Q9BWQ8 316 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 GHITMQ9H3K2 345 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 RANBP3Q9H6Z4 567 aaPredicted RBP12.96□□□□□ -0.33
SCARB2-227ENST00000640957 AUNIPQ9H7T9 357 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 IFT46Q9NQC8 304 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 ZNF282Q9UDV7 671 aaPredicted RBP12.96□□□□□ -0.33
SCARB2-227ENST00000640957 LHX6Q9UPM6 363 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 KCNMB2Q9Y691 235 aa12.96□□□□□ -0.33
SCARB2-227ENST00000640957 SLC22A23A1A5C7 686 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 OR6C75A6NL08 312 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 MID1O15344 667 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 CA12O43570 354 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 SLC28A2O43868 658 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 IL3P08700 152 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 SNRPBP14678 240 aaKnown RBP12.96□□□□□ -0.34
SCARB2-227ENST00000640957 FUT1P19526 365 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 AKR1C2P52895 323 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 BLVRAP53004 296 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 AKR1C1Q04828 323 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 PLA1AQ53H76 456 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 BICRALQ6AI39 1079 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 EXOSC8Q96B26 276 aaKnown RBP12.96□□□□□ -0.34
SCARB2-227ENST00000640957 CREB3L1Q96BA8 519 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 SLC6A16Q9GZN6 736 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 ELAC1Q9H777 363 aaKnown RBP12.96□□□□□ -0.34
SCARB2-227ENST00000640957 FOLH1BQ9HBA9 442 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 PRDM9Q9NQV7 894 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 CYB5R1Q9UHQ9 305 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 CLEC4EQ9ULY5 219 aa12.96□□□□□ -0.34
SCARB2-227ENST00000640957 PRMT3O60678 531 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 REM1O75628 298 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 IGSF11Q5DX21 431 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 TMEM88Q6PEY1 159 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 NHLRC1Q6VVB1 395 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 DOK4Q8TEW6 326 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 DMRTA2Q96SC8 542 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 HTATIP2Q9BUP3 242 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 CCDC86Q9H6F5 360 aaKnown RBP12.95□□□□□ -0.34
SCARB2-227ENST00000640957 ZDHHC6Q9H6R6 413 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 RC3H2Q9HBD1 1191 aaKnown RBP12.95□□□□□ -0.34
SCARB2-227ENST00000640957 DLL4Q9NR61 685 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 LHX3Q9UBR4 397 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 DIMT1Q9UNQ2 313 aaKnown RBP12.95□□□□□ -0.34
SCARB2-227ENST00000640957 PATJQ8NI35 1801 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 FAM74A7A6NL05 159 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 SOCS6O14544 535 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 EOMESO95936 686 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 IFNA16P05015 189 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 PDHA2P29803 388 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 ZP1P60852 638 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 ILKQ13418 452 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 FAM74A3Q4VXF1 159 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 ADGRF1Q5T601 910 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms