RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 ROPN1Q9HAT0 212 aaPredicted RBP23.02■■□□□ 1.28
VEGFA-230ENST00000640482 LRTM1Q9HBL6 345 aa23.02■■□□□ 1.28
VEGFA-230ENST00000640482 C1orf109Q9NX04 203 aa23.02■■□□□ 1.28
VEGFA-230ENST00000640482 LGALS13Q9UHV8 139 aa23.02■■□□□ 1.28
VEGFA-230ENST00000640482 FIS1Q9Y3D6 152 aa23.02■■□□□ 1.28
VEGFA-230ENST00000640482 CCL27Q9Y4X3 112 aa23.02■■□□□ 1.28
VEGFA-230ENST00000640482 NPIPB8E9PQR5 432 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 NEFHP12036 1026 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 IGFBP2P18065 325 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 GCKP35557 465 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 ADH7P40394 386 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 ZNF155Q12901 538 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-230ENST00000640482 EIPR1Q53HC9 387 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 NPSR1Q6W5P4 371 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 RNF165Q6ZSG1 346 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 SLC44A2Q8IWA5 706 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-230ENST00000640482 DTNBP1Q96EV8 351 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 LURAP1Q96LR2 239 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 FAM111AQ96PZ2 611 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 ADOQ96SZ5 270 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 NPDC1Q9NQX5 325 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-230ENST00000640482 MAPRE3Q9UPY8 281 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 EXO1Q9UQ84 846 aaKnown RBP23.01■■□□□ 1.27
VEGFA-230ENST00000640482 SLC6A5Q9Y345 797 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 OR10H1Q9Y4A9 318 aa23.01■■□□□ 1.27
VEGFA-230ENST00000640482 C2orf72A6NCS6 295 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 TSPAN2O60636 221 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 CBR3O75828 277 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 MC3RP41968 323 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 MRPS22P82650 360 aaKnown RBP23■■□□□ 1.27
VEGFA-230ENST00000640482 KIAA0040Q15053 153 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 PRSS53Q2L4Q9 553 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 WIPI1Q5MNZ9 446 aaPredicted RBP23■■□□□ 1.27
VEGFA-230ENST00000640482 VASNQ6EMK4 673 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 TMEM107Q6UX40 140 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 LARP4Q71RC2 724 aaKnown RBP eCLIP23■■□□□ 1.271e-25■□□□□ 10.3
VEGFA-230ENST00000640482 FAM83FQ8NEG4 500 aaPredicted RBP23■■□□□ 1.27
VEGFA-230ENST00000640482 AENQ8WTP8 325 aaKnown RBP23■■□□□ 1.27
VEGFA-230ENST00000640482 PRDM14Q9GZV8 571 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 GLIPR2Q9H4G4 154 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 C19orf53Q9UNZ5 99 aaPredicted RBP23■■□□□ 1.27
VEGFA-230ENST00000640482 PTGDR2Q9Y5Y4 395 aa23■■□□□ 1.27
VEGFA-230ENST00000640482 HSPB2A8KAH6 182 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 PLOD2O00469 737 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 NPHS1O60500 1241 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 NME6O75414 186 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-230ENST00000640482 ALDH3A1P30838 453 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 PNLIPRP2P54317 469 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 HSPB2Q16082 182 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 SLC25A35Q3KQZ1 300 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 ACSF3Q4G176 576 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-230ENST00000640482 WDR93Q6P2C0 686 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 CLYBLQ8N0X4 340 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 ABTB1Q969K4 478 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-230ENST00000640482 AMDHD1Q96NU7 426 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 UGT2B28Q9BY64 529 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 EML4Q9HC35 981 aaKnown RBP22.99■■□□□ 1.27
VEGFA-230ENST00000640482 SERHLQ9NQF3 203 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 DDX18Q9NVP1 670 aaKnown RBP22.99■■□□□ 1.27
VEGFA-230ENST00000640482 CAMK2AQ9UQM7 478 aa22.99■■□□□ 1.27
VEGFA-230ENST00000640482 SLU7O95391 586 aaKnown RBP22.98■■□□□ 1.27
VEGFA-230ENST00000640482 EPPINO95925 133 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 ACTL6AO96019 429 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 BMP7P18075 431 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 TLE4Q04727 773 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 KANK2Q63ZY3 851 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 Q6ZSR9 355 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 YRDCQ86U90 279 aaKnown RBP22.98■■□□□ 1.27
VEGFA-230ENST00000640482 PLCZ1Q86YW0 608 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 LACC1Q8IV20 430 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 CAVIN3Q969G5 261 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 EGLN2Q96KS0 407 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 CCT7Q99832 543 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 SLC24A3Q9HC58 644 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 WIF1Q9Y5W5 379 aa22.98■■□□□ 1.27
VEGFA-230ENST00000640482 SPAG7O75391 227 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 LINC00032P0C843 101 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 TACR1P25103 407 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 PSG6Q00889 435 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 ZNHIT3Q15649 155 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-230ENST00000640482 WDR53Q7Z5U6 358 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-230ENST00000640482 DMRTC2Q8IXT2 367 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-230ENST00000640482 OR2L13Q8N349 312 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 WDSUB1Q8N9V3 476 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 OR14L1PQ8NHC6 308 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 TCP10LQ8TDR4 215 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 EFHD2Q96C19 240 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-230ENST00000640482 ELP4Q96EB1 424 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 FCRL1Q96LA6 429 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 MECRQ9BV79 373 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 TUBB1Q9H4B7 451 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 SLC17A7Q9P2U7 560 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 TMED5Q9Y3A6 229 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 DNAJC15Q9Y5T4 150 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 ADGRG4Q8IZF6 3080 aa22.97■■□□□ 1.27
VEGFA-230ENST00000640482 CSMD1Q96PZ7 3565 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 PKDREJQ9NTG1 2253 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 UPK1AO00322 258 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 PDPK1O15530 556 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 CHRNGP07510 517 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms