RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PTPN6P29350 595 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 GABRA3P34903 492 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 CHI3L1P36222 383 aaPredicted RBP12.16□□□□□ -0.46
GTF3A-209ENST00000640289 PRIM2P49643 509 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 FBXW4P57775 412 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 ZNF169Q14929 603 aaPredicted RBP12.16□□□□□ -0.46
GTF3A-209ENST00000640289 DUSP5Q16690 384 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 ZNF766Q5HY98 468 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 SAXO2Q658L1 398 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 CDC73Q6P1J9 531 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 GALNT10Q86SR1 603 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 MTDHQ86UE4 582 aaKnown RBP12.16□□□□□ -0.46
GTF3A-209ENST00000640289 RETREG3Q86VR2 466 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 GPALPP1Q8IXQ4 340 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 Q8NA96 180 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 FAM13CQ8NE31 585 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 OR10G3Q8NGC4 313 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 OR5D16Q8NGK9 328 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 GPR151Q8TDV0 419 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 PNPLA2Q96AD5 504 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 EFHD2Q96C19 240 aaPredicted RBP12.16□□□□□ -0.46
GTF3A-209ENST00000640289 AURKBQ96GD4 344 aaPredicted RBP12.16□□□□□ -0.46
GTF3A-209ENST00000640289 SLC35G5Q96KT7 338 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 ACTRT3Q9BYD9 372 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 PAIP1Q9H074 479 aaKnown RBP12.16□□□□□ -0.46
GTF3A-209ENST00000640289 Q9N2J8 555 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 SLAMF8Q9P0V8 285 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 MAP10Q9P2G4 905 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 CBLCQ9ULV8 474 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 VPS4AQ9UN37 437 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 OR10H1Q9Y4A9 318 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 KCNE3Q9Y6H6 103 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 CACNA1GO43497 2377 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 CROCCQ5TZA2 2017 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 ITPR1Q14643 2758 aa12.16□□□□□ -0.46
GTF3A-209ENST00000640289 BSNQ9UPA5 3926 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 CPAMD8Q8IZJ3 1885 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 G3V3Y1 287 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 CDK2AP1O14519 115 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 CCDC22O60826 627 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 REM1O75628 298 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 PPM1BO75688 479 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 SP1P08047 785 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 SNRPB2P08579 225 aaKnown RBP12.15□□□□□ -0.46
GTF3A-209ENST00000640289 ALOX5P09917 674 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 CCL3P10147 92 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 HOXB9P17482 250 aaPredicted RBP12.15□□□□□ -0.46
GTF3A-209ENST00000640289 MATN1P21941 496 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 RFX3P48380 749 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 TRPC1P48995 793 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 MAN2A2P49641 1150 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 NTRK2Q16620 822 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 SLC25A25Q6KCM7 469 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 ZCCHC12Q6PEW1 402 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 BHLHB9Q6PI77 547 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 ANGPTL8Q6UXH0 198 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 RTL4Q6ZR62 310 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 GALNTL5Q7Z4T8 443 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 MSRB3Q8IXL7 192 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 TRIML2Q8N7C3 387 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 BCORP1Q8N888 145 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 PSD4Q8NDX1 1056 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 PNPT1Q8TCS8 783 aaKnown RBP12.15□□□□□ -0.46
GTF3A-209ENST00000640289 ADAMTS15Q8TE58 950 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 ZFP90Q8TF47 636 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 CDS1Q92903 461 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 NEURL3Q96EH8 262 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 RMND5BQ96G75 393 aaPredicted RBP12.15□□□□□ -0.46
GTF3A-209ENST00000640289 SLC35A4Q96G79 324 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 SCMH1Q96GD3 660 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 CCDC106Q9BWC9 280 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 MYLK2Q9H1R3 596 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 OR51I1Q9H343 314 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 LEF1Q9UJU2 399 aaPredicted RBP12.15□□□□□ -0.46
GTF3A-209ENST00000640289 FAF1Q9UNN5 650 aaPredicted RBP12.15□□□□□ -0.46
GTF3A-209ENST00000640289 NDUFAF1Q9Y375 327 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 PCDHB14Q9Y5E9 798 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 CHCHD2Q9Y6H1 151 aaPredicted RBP12.15□□□□□ -0.46
GTF3A-209ENST00000640289 CAPN7Q9Y6W3 813 aa12.15□□□□□ -0.46
GTF3A-209ENST00000640289 A0A096LPI6 279 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 LOC100653049A0A140TA62 436 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 TTC36A6NLP5 189 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 FBP2O00757 339 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 ANGPT2O15123 496 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 NME2P1O60361 137 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 TSPAN2O60636 221 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 UGT2B11O75310 529 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 C1QL1O75973 258 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 KRT34O76011 436 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 SORBS2O94875 1100 aaKnown RBP12.14□□□□□ -0.47
GTF3A-209ENST00000640289 FAM107AO95990 144 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 IGKV1D-16P01601 117 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 ZCCHC18P0CG32 403 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 CD46P15529 392 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 NME2P22392 152 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 TMED10P49755 219 aaKnown RBP12.14□□□□□ -0.47
GTF3A-209ENST00000640289 GPR85P60893 370 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 COX20Q5RI15 118 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 LRIF1Q5T3J3 769 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 CCNJQ5T5M9 372 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms