RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ARRDC3Q96B67 414 aa13.64□□□□□ -0.23
SCARB2-216ENST00000639300 CCDC115Q96NT0 180 aa13.64□□□□□ -0.23
SCARB2-216ENST00000639300 ZFYVE21Q9BQ24 234 aa13.64□□□□□ -0.23
SCARB2-216ENST00000639300 TREX2Q9BQ50 279 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-216ENST00000639300 STARD5Q9NSY2 213 aa13.64□□□□□ -0.23
SCARB2-216ENST00000639300 USP36Q9P275 1121 aaKnown RBP13.64□□□□□ -0.23
SCARB2-216ENST00000639300 OR5K4A6NMS3 321 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 PEPDP12955 493 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 PXNP49023 591 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-216ENST00000639300 MRPL58Q14197 206 aaKnown RBP13.63□□□□□ -0.23
SCARB2-216ENST00000639300 FAM43BQ6ZT52 329 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-216ENST00000639300 OR8J2Q8NGG1 315 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 CREB3L4Q8TEY5 395 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 RIT1Q92963 219 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 PDE7BQ9NP56 450 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 SERINC1Q9NRX5 453 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 SACM1LQ9NTJ5 587 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 NLKQ9UBE8 527 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 PRODH2Q9UF12 536 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 CARD8Q9Y2G2 431 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 GXYLT2A0PJZ3 443 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 FXYD1O00168 92 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 SDC3O75056 442 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 TRIM3O75382 744 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-216ENST00000639300 THEGLP0DJG4 465 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 ADORA3P0DMS8 318 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 HIST1H1TP22492 207 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-216ENST00000639300 FAM78AQ5JUQ0 283 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 SDR16C5Q8N3Y7 309 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 CEP76Q8TAP6 659 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 QRSL1Q9H0R6 528 aaKnown RBP13.63□□□□□ -0.23
SCARB2-216ENST00000639300 NANSQ9NR45 359 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 STOML2Q9UJZ1 356 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 TRAPPC13A5PLN9 417 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 SLC22A31A6NKX4 558 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 FAM171A2A8MVW0 826 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 SEMA4FO95754 770 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 P2RY2P41231 377 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 COX20Q5RI15 118 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 AFMIDQ63HM1 303 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 S100A16Q96FQ6 103 aaKnown RBP13.63□□□□□ -0.23
SCARB2-216ENST00000639300 SDHAF3Q9NRP4 125 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 MAU2Q9Y6X3 613 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 TPRP12270 2363 aaKnown RBP13.63□□□□□ -0.23
SCARB2-216ENST00000639300 FAM227AF5H4B4 570 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 H3BQ06 376 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-216ENST00000639300 CLEC3AO75596 197 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 ZDHHC11BP0C7U3 371 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 ITGA3P26006 1051 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 GJA4P35212 333 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 APOFQ13790 326 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 IRF4Q15306 451 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 HSD17B12Q53GQ0 312 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 PGBD2Q6P3X8 592 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 PODNL1Q6PEZ8 512 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 OLIG3Q7RTU3 272 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 TIGD4Q8IY51 512 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 RFT1Q96AA3 541 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 SGTBQ96EQ0 304 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 INSM2Q96T92 566 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-216ENST00000639300 NKX2-4Q9H2Z4 354 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 KCMF1Q9P0J7 381 aa13.63□□□□□ -0.23
SCARB2-216ENST00000639300 LTBP4Q8N2S1 1624 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 NPIPA5E9PKD4 350 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 CTDSP2O14595 271 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 OR2B3O76000 313 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 CDK1P06493 297 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 SPARCP09486 303 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 ADH7P40394 386 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 OR3A3P47888 321 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 OR3A2P47893 321 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 RGS6P49758 472 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 PFN3P60673 137 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 CHAF1BQ13112 559 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 ELOCQ15369 112 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 ANKRD34AQ69YU3 496 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 METTL4Q8N3J2 472 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 GGHQ92820 318 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 MSLNLQ96KJ4 702 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 RMI1Q9H9A7 625 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 LTB4R2Q9NPC1 389 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 SLC7A7Q9UM01 511 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 NPIPA1Q9UND3 350 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 GMEB1Q9Y692 573 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 SEMA3DO95025 777 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 ARAFP10398 606 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 HNRNPA2B1P22626 353 aaKnown RBP13.62□□□□□ -0.23
SCARB2-216ENST00000639300 SSTR4P31391 388 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 GIPRP48546 466 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 ARHGAP19Q14CB8 494 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 RASGRP3Q8IV61 690 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 TMEM156Q8N614 296 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 ZNF69Q9UC07 566 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 PFDN2Q9UHV9 154 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 TOXO94900 526 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 IGLV3-27P01718 113 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 CXCR4P61073 352 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 RPL6Q02878 288 aaKnown RBP13.62□□□□□ -0.23
SCARB2-216ENST00000639300 RELAQ04206 551 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 SCRN3Q0VDG4 424 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms