RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PRB4P10163 310 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 SAGP10523 405 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 FAHP16930 419 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 ERCC2P18074 760 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 PSMA5P28066 241 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 PSMB10P40306 273 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 PRKCIP41743 596 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 PAFAH1B1P43034 410 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 IDH3GP51553 393 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 RAD23AP54725 363 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 NRG3P56975 720 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 DGCR2P98153 550 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 DEUP1Q05D60 604 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 NME3Q13232 169 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 EFNB3Q15768 340 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 ADIPOQQ15848 244 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 SLC25A52Q3SY17 297 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 TCP11X2Q5H9J9 407 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 FDX2Q6P4F2 183 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 VWA1Q6PCB0 445 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 USP51Q70EK9 711 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 INTS8Q75QN2 995 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 RRAGAQ7L523 313 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 ZDHHC13Q8IUH4 622 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 GLB1L2Q8IW92 636 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 CCDC65Q8IXS2 484 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 MOSPD2Q8NHP6 518 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 CLDND2Q8NHS1 167 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 GABPB2Q8TAK5 448 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 WDR60Q8WVS4 1066 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 DNAJC19Q96DA6 116 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 EEF2KMTQ96G04 330 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 APOPT1Q96IL0 206 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 RBM41Q96IZ5 413 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 DRC3Q9H069 523 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 PCDHAC1Q9H158 963 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 UBQLN3Q9H347 655 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 C7orf69Q9H7B7 122 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 HEYLQ9NQ87 328 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 FAM120CQ9NX05 1096 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 TAS2R10Q9NYW0 307 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 NDUFAF4Q9P032 175 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 IGHV3-20A0A0C4DH32 117 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 SYCE3A1L190 88 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 CCDC151A5D8V7 595 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 E7ENX8 843 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 MED7O43513 233 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 KIF5CO60282 957 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 EXOC3O60645 756 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TRIM3O75382 744 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 SLC22A3O75751 556 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 SNX4O95219 450 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ABHD16AO95870 558 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TGFB1P01137 390 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 THY1P04216 161 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 DAOP14920 347 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 CHRM3P20309 590 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 RAB6AP20340 208 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 JAK1P23458 1154 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 PAX7P23759 505 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 GRK5P34947 590 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 PGM1P36871 562 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 RGRP47804 291 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF41P51814 821 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 ALDH18A1P54886 795 aaKnown RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 SLC12A2P55011 1212 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 GP2P55259 537 aaKnown RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 C21orf58P58505 322 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ERVFRD-1P60508 538 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 HABP2Q14520 560 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 CPSF6Q16630 551 aaKnown RBP eCLIP3□□□□□ -1.93
CCDC7-213ENST00000639290 SLC9B1Q4ZJI4 515 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 DEPDC1Q5TB30 811 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 SLC22A10Q63ZE4 541 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 STEAP3Q658P3 488 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF549Q6P9A3 640 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 CYP20A1Q6UW02 462 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TMEM108Q6UXF1 575 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 RNF111Q6ZNA4 994 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 CCDC73Q6ZRK6 1079 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 QSOX2Q6ZRP7 698 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 FAM83HQ6ZRV2 1179 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 C11orf57Q6ZUT1 292 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 SERPINA9Q86WD7 417 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 FAM90A1Q86YD7 464 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TDRPQ86YL5 185 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 B3GNT7Q8NFL0 401 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TRIM58Q8NG06 486 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 PHOSPHO1Q8TCT1 267 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 STON2Q8WXE9 905 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 HOXB13Q92826 284 aaPredicted RBP3□□□□□ -1.93
CCDC7-213ENST00000639290 RAB24Q969Q5 203 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TMX3Q96JJ7 454 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 DGAT2Q96PD7 388 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 MGME1Q9BQP7 344 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 YIPF2Q9BWQ6 316 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 SPATA16Q9BXB7 569 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 TRIM5Q9C035 493 aa3□□□□□ -1.93
CCDC7-213ENST00000639290 PITHD1Q9GZP4 211 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms