RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 YBEYP58557 167 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-221ENST00000638141 LGALS3BPQ08380 585 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 SERTAD2Q14140 314 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 C18orf21Q32NC0 220 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-221ENST00000638141 RNF212Q495C1 297 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 MPPE1Q53F39 396 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 FAM76BQ5HYJ3 339 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 PRAMEF19Q5SWL8 479 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 SFRP5Q5T4F7 317 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF660Q6AZW8 331 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-221ENST00000638141 HIST3H2AQ7L7L0 130 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 SIAH3Q8IW03 269 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 SLC30A8Q8IWU4 369 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 FAM98AQ8NCA5 519 aaKnown RBP11.34□□□□□ -0.59
CAPN3-221ENST00000638141 OR4K2Q8NGD2 314 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 OR6K3Q8NGY3 331 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 GNPDA2Q8TDQ7 276 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 HIST1H2ACQ93077 130 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 ZDHHC12Q96GR4 267 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 C12orf66Q96MD2 445 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF285Q96NJ3 590 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 C20orf85Q9H1P6 137 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 BARX1Q9HBU1 254 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-221ENST00000638141 NIT2Q9NQR4 276 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 ELOVL2Q9NXB9 296 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 FLRT1Q9NZU1 646 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 MGAT4CQ9UBM8 478 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 SLC22A7Q9Y694 548 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 PLXNB2O15031 1838 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF106Q9H2Y7 1883 aaKnown RBP11.33□□□□□ -0.59
CAPN3-221ENST00000638141 IGLV3-10A0A075B6K4 115 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 LRRC72A6NJI9 287 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ARHGEF33A8MVX0 844 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 NEDD8-MDP1E9PL57 170 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 LGALS2P05162 132 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SRPRAP08240 638 aaKnown RBP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SPP1P10451 314 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ACP2P11117 423 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 LPOP22079 712 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 TACR1P25103 407 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 DDX6P26196 483 aaKnown RBP eCLIP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 PITPNAQ00169 270 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ECH1Q13011 328 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 HTR4Q13639 388 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 PTPRRQ15256 657 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SEC23BQ15437 767 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SYT14P1Q58G82 188 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ELFN2Q5R3F8 820 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ANXA8L1Q5VT79 327 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 NCEH1Q6PIU2 408 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 BAIAP2L2Q6UXY1 529 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 GLT6D1Q7Z4J2 308 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 CAMKMTQ7Z624 323 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 BMPERQ8N8U9 685 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 EDARADDQ8WWZ3 215 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ELP4Q96EB1 424 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SARS2Q9NP81 518 aaKnown RBP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 FBXL3Q9UKT7 428 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ENTPD4Q9Y227 616 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 LOC730098B7Z3J9 87 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 CACNB4O00305 520 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 CTDSPLO15194 276 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 GREM1O60565 184 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 EFCAB14O75071 495 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 FZD7O75084 574 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 UBL3O95164 117 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SERPINA3P01011 423 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 EIF4EP06730 217 aaKnown RBP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 NUDT7P0C024 238 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ZNF865P0CJ78 1059 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 PRSS56P0CW18 603 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 IFNGR1P15260 489 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 LAG3P18627 525 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ATP5C1P36542 298 aaKnown RBP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 XKP51811 444 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SOX4Q06945 474 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SERINC3Q13530 473 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 KLF9Q13886 244 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ZNF235Q14590 738 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 TTLL4Q14679 1199 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 MBTPS1Q14703 1052 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 CRB2Q5IJ48 1285 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 DEF8Q6ZN54 512 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 LDLRAD3Q86YD5 345 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 NKAIN4Q8IVV8 208 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SPAG16Q8N0X2 631 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 OR6V1Q8N148 313 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 TCEANCQ8N8B7 351 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 BPIFCQ8NFQ6 507 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 BEST4Q8NFU0 473 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SELENOMQ8WWX9 145 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 PSMG2Q969U7 264 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 TMEM41AQ96HV5 264 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 FUBP3Q96I24 572 aaKnown RBP eCLIP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ABHD1Q96SE0 405 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 PIGMQ9H3S5 423 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 RNF122Q9H9V4 155 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 SEMA3GQ9NS98 782 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ZNF282Q9UDV7 671 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms