RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 USP9XQ93008 2570 aaPredicted RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 COL6A6A6NMZ7 2263 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 THSD7BQ9C0I4 1608 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 SGK494L7N484 410 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 ACOT7O00154 380 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 TOX3O15405 576 aaPredicted RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 CDC123O75794 336 aaPredicted RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 PIAS2O75928 621 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 SNX4O95219 450 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 NSA2O95478 260 aaKnown RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 ADAP00813 363 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 TACSTD2P09758 323 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 FURINP09958 794 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 SELENOWP63302 87 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 MRPS15P82914 257 aaKnown RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 ZXDBP98169 803 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 B4GALNT1Q00973 533 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 SGCBQ16585 318 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 C1orf189Q5VU69 101 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 KIAA1614Q5VZ46 1190 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 GALNT5Q7Z7M9 940 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 CLECL1Q8IZS7 167 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 METTL27Q8N6F8 245 aaPredicted RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 ZNF354BQ96LW1 612 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 OR1F2PQ96R84 312 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 ARPC5LQ9BPX5 153 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 DUSP15Q9H1R2 295 aaPredicted RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 ERVMER34-1Q9H9K5 563 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 ENPP4Q9Y6X5 453 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 TRAPPC13A5PLN9 417 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 LRIT2A6NDA9 550 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 EFCAB7A8K855 629 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 VSTM5A8MXK1 200 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 EFCAB9A8MZ26 197 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 PPP6CO00743 305 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 RGS5O15539 181 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 HCRTR2O43614 444 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 AIFM1O95831 613 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 CYP4B1P13584 511 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 FCARP24071 287 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 PSMA1P25786 263 aaKnown RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 YAP1P46937 504 aaKnown RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 BLVRAP53004 296 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 NXPH1P58417 271 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 ITGADQ13349 1161 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 CLCA4Q14CN2 919 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 SLC48A1Q6P1K1 146 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 TMEM71Q6P5X7 295 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 SHQ1Q6PI26 577 aaKnown RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 C5orf46Q6UWT4 87 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 PAMR1Q6UXH9 720 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 LIAT1Q6ZQX7 453 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 PELI3Q8N2H9 469 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 ANKFN1Q8N957 763 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 DTWD2Q8NBA8 298 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 OR51Q1Q8NH59 317 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 ASB15Q8WXK1 588 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 PMEPA1Q969W9 287 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 EFHD2Q96C19 240 aaPredicted RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 MOCOSQ96EN8 888 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 LOXL4Q96JB6 756 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 RHOVQ96L33 236 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 TRNT1Q96Q11 434 aaKnown RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 NODALQ96S42 347 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 MAP3K3Q99759 626 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 DDX31Q9H8H2 851 aaKnown RBP5.2□□□□□ -1.58
CHD2-227ENST00000637572 UCK1Q9HA47 277 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 POMT2Q9UKY4 750 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 ICKQ9UPZ9 632 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 PCDHGA5Q9Y5G8 931 aa5.2□□□□□ -1.58
CHD2-227ENST00000637572 CDC14CA4D256 554 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 H0Y8X5 98 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 NME4O00746 187 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 ASNA1O43681 348 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 PFDN1O60925 122 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 SERPINA3P01011 423 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 HMGN2P05204 90 aaKnown RBP5.19□□□□□ -1.58
CHD2-227ENST00000637572 ETFAP13804 333 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 PVRP15151 417 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 RPS3AP61247 264 aaKnown RBP5.19□□□□□ -1.58
CHD2-227ENST00000637572 RELAQ04206 551 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 GANABQ14697 944 aaKnown RBP5.19□□□□□ -1.58
CHD2-227ENST00000637572 TBC1D25Q3MII6 688 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 ARMCX4Q5H9R4 360 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 FAM71E1Q6IPT2 247 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 CGB2Q6NT52 195 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 POMZP3Q6PJE2 187 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 GID4Q8IVV7 300 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 SLC34A3Q8N130 599 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 FAM110BQ8TC76 370 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 SNX33Q8WV41 574 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 NUDT8Q8WV74 236 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 SLC46A1Q96NT5 459 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 RBP7Q96R05 134 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 NAA11Q9BSU3 229 aaPredicted RBP5.19□□□□□ -1.58
CHD2-227ENST00000637572 USP36Q9P275 1121 aaKnown RBP5.19□□□□□ -1.58
CHD2-227ENST00000637572 CKLFQ9UBR5 152 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 PADI1Q9ULC6 663 aa5.19□□□□□ -1.58
CHD2-227ENST00000637572 PTRH2Q9Y3E5 179 aaKnown RBP5.19□□□□□ -1.58
CHD2-227ENST00000637572 A0A1W2PRG6 482 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms