RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ZDHHC2Q9UIJ5 367 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 NPIPA2E9PIF3 369 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 NPIPA3F8WFD2 350 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 UPK1AO00322 258 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 PDPK1O15530 556 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 WDR1O75083 606 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 BCKDHAP12694 445 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 ARRB2P32121 409 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 MC3RP41968 323 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 PRSS53Q2L4Q9 553 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 ZNF630Q2M218 657 aaPredicted RBP20.46■□□□□ 0.87
SF1-220ENST00000626028 SMU1Q2TAY7 513 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 GALNTL6Q49A17 601 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 CYP27C1Q4G0S4 372 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 EMC4Q5J8M3 183 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 WLSQ5T9L3 541 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 FNDC7Q5VTL7 733 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 TIGD3Q6B0B8 471 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 CENPHQ9H3R5 247 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 NTMQ9P121 344 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 C15orf41Q9Y2V0 281 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 LIPGQ9Y5X9 500 aa20.46■□□□□ 0.87
SF1-220ENST00000626028 PKDREJQ9NTG1 2253 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 HCFC1P51610 2035 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 PRSS44E7EML9 344 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 TSPAN2O60636 221 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 UGT2B11O75310 529 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 LYPLA1O75608 230 aaPredicted RBP20.45■□□□□ 0.86
SF1-220ENST00000626028 REM1O75628 298 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 CLDN14O95500 239 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 HSPA4LO95757 839 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 HPNP05981 417 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 CELA3AP09093 270 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 PRPS2P11908 318 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 GABRA1P14867 456 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 ACVR2AP27037 513 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 GDF1P27539 372 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 PTGER4P35408 488 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 MAD2L1Q13257 205 aaPredicted RBP20.45■□□□□ 0.86
SF1-220ENST00000626028 MLC1Q15049 377 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 ZNHIT3Q15649 155 aaPredicted RBP20.45■□□□□ 0.86
SF1-220ENST00000626028 TMEM107Q6UX40 140 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 LIX1Q8N485 282 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 OR1J4Q8NGS1 313 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 TMBIM1Q969X1 311 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 TSSK3Q96PN8 268 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 OSBPL11Q9BXB4 747 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 RUBCNLQ9H714 662 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 EXO5Q9H790 373 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 ANKRA2Q9H9E1 313 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 MRTO4Q9UKD2 239 aaKnown RBP20.45■□□□□ 0.86
SF1-220ENST00000626028 ACAD8Q9UKU7 415 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 HRH3Q9Y5N1 445 aa20.45■□□□□ 0.86
SF1-220ENST00000626028 CYSRT1A8MQ03 144 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 ZNHIT1O43257 154 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 HNRNPRO43390 633 aaKnown RBP20.44■□□□□ 0.86
SF1-220ENST00000626028 ICOSLGO75144 302 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 IL12BP29460 328 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 HPCAL1P37235 193 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 CDK9P50750 372 aaKnown RBP20.44■□□□□ 0.86
SF1-220ENST00000626028 SLC18A1P54219 525 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 CORO7P57737 925 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 ABCE1P61221 599 aaKnown RBP20.44■□□□□ 0.86
SF1-220ENST00000626028 PSG6Q00889 435 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 CHI3L2Q15782 390 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 C6orf136Q5SQH8 315 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 BICRALQ6AI39 1079 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 C3P1Q6ZMU1 363 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 SLC44A2Q8IWA5 706 aaPredicted RBP20.44■□□□□ 0.86
SF1-220ENST00000626028 CEP70Q8NHQ1 597 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 AGR3Q8TD06 166 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 RNF138Q8WVD3 245 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 ASB5Q8WWX0 329 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 RND1Q92730 232 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 PNPLA3Q9NST1 481 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 KLRF1Q9NZS2 232 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 ATP6V1HQ9UI12 483 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 HAO1Q9UJM8 370 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 MAPRE3Q9UPY8 281 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 RAP2CQ9Y3L5 183 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 OR10H1Q9Y4A9 318 aa20.44■□□□□ 0.86
SF1-220ENST00000626028 PRAMEF25A6NGN4 478 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 FAM47E-STBD1D6RA91 191 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 SNPHO15079 494 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 LRATO95237 230 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 HTR1EP28566 365 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 PTPN6P29350 595 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 ZNF155Q12901 538 aaPredicted RBP20.43■□□□□ 0.86
SF1-220ENST00000626028 SF3B4Q15427 424 aaKnown RBP eCLIP20.43■□□□□ 0.861e-6■■■■□ 24.8
SF1-220ENST00000626028 NHSL2Q5HYW2 709 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 SP5Q6BEB4 398 aaPredicted RBP20.43■□□□□ 0.86
SF1-220ENST00000626028 NPSR1Q6W5P4 371 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 LRRC34Q8IZ02 419 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 HOXB13Q92826 284 aaPredicted RBP20.43■□□□□ 0.86
SF1-220ENST00000626028 GFM2Q969S9 779 aaKnown RBP20.43■□□□□ 0.86
SF1-220ENST00000626028 GNRHR2Q96P88 292 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 NODALQ96S42 347 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 ADOQ96SZ5 270 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 LMF2Q9BU23 707 aaKnown RBP20.43■□□□□ 0.86
SF1-220ENST00000626028 C3orf14Q9HBI5 128 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms