RNA–Protein interactions for RNA: ENST00000622854.1

AP001065.3-201, humanhuman

BASIC

Gene AP001065.3, Length 646 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001065.3-201ENST00000622854 CLIP3Q96DZ5 547 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 RBM18Q96H35 190 aaKnown RBP10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 NAF1Q96HR8 494 aaKnown RBP10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 ZNF597Q96LX8 424 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 TRNT1Q96Q11 434 aaKnown RBP10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 ZNF607Q96SK3 696 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 PELOQ9BRX2 385 aaKnown RBP10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 VN1R1Q9GZP7 353 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 PIGUQ9H490 435 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 PARD6AQ9NPB6 346 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 MKKSQ9NPJ1 570 aaPredicted RBP10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 TMEM9BQ9NQ34 198 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 PNO1Q9NRX1 252 aaKnown RBP10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 EXD2Q9NVH0 621 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 NDUFAF4Q9P032 175 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 SEC14L3Q9UDX4 400 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 LIPT1Q9Y234 373 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 DTX4Q9Y2E6 619 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 PADI2Q9Y2J8 665 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 HEMK1Q9Y5R4 338 aaPredicted RBP10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 U3KQV3 271 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 DSPPQ9NZW4 1301 aa10.07□□□□□ -0.8
AP001065.3-201ENST00000622854 A0A0G2JPF8 293 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 DUXAA6NLW8 204 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 C4orf47A7E2U8 309 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 C17orf105B2RV13 164 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 HNRNPCL2B2RXH8 293 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 HNRNPCL3B7ZW38 293 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 DLGAP1O14490 977 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 E2F6O75461 281 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 EPPINO95925 133 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 AGR2O95994 175 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 FESP07332 822 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 HNRNPCL4P0DMR1 293 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 UQCRBP14927 111 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 ETS2P15036 469 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 ZNF28P17035 718 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 TNNI3P19429 210 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 GALNSP34059 522 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 GABRA3P34903 492 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 DCTP40126 519 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 YAP1P46937 504 aaKnown RBP10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 KCNJ5P48544 419 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 HPCAP84074 193 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 GNA13Q14344 377 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 PUM1Q14671 1186 aaKnown RBP eCLIP10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 LAPTM4AQ15012 233 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 ARHGAP11BQ3KRB8 267 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 DCST2Q5T1A1 773 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 OTUD3Q5T2D3 398 aaPredicted RBP10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 LCN10Q6JVE6 187 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 FRRS1Q6ZNA5 592 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 STK32CQ86UX6 486 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 LACC1Q8IV20 430 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 PACRGLQ8N7B6 248 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 ZNF321PQ8N8H1 164 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 COX18Q8N8Q8 333 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 OR4D11Q8NGI4 311 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 OR5K1Q8NHB7 308 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 VANGL1Q8TAA9 524 aaPredicted RBP10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 GPR151Q8TDV0 419 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 PTPMT1Q8WUK0 201 aaPredicted RBP10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 HOXB13Q92826 284 aaPredicted RBP10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 VSTM2LQ96N03 204 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 BTBD9Q96Q07 612 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 STACQ99469 402 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 BARD1Q99728 777 aaKnown RBP10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 WFDC6Q9BQY6 131 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 LMF2Q9BU23 707 aaKnown RBP10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 BTBD2Q9BX70 525 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 COL25A1Q9BXS0 654 aaPredicted RBP10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 AMBRA1Q9C0C7 1298 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 DUSP22Q9NRW4 184 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 THSD1Q9NS62 852 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 SEMA4GQ9NTN9 838 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 FAM86C1Q9NVL1 165 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 CALML5Q9NZT1 146 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 BAG5Q9UL15 447 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 LRCH1Q9Y2L9 728 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 SH3GLB1Q9Y371 365 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 TESMINQ9Y4I5 508 aa10.06□□□□□ -0.8
AP001065.3-201ENST00000622854 IGLV3-12A0A075B6K2 115 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 NPIPA5A0A0B4J1W7 369 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 CENPVL1A0A0U1RR11 272 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 TCRBV16S1A1N1A0A5B0 115 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 NPIPA7E9PJI5 369 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 G3V2T6 193 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 H0YJX3 145 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 J3KTA2 159 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 M0R3H8 397 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 POLR1CO15160 346 aaPredicted RBP10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 FCMRO60667 390 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 PRAMEF2O60811 474 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 SERPINB7O75635 380 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 NKX2-2O95096 273 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 IFNW1P05000 195 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 ALPPP05187 535 aa10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 RPSAP08865 295 aaKnown RBP10.05□□□□□ -0.8
AP001065.3-201ENST00000622854 NPIPA8P0DM63 369 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms