RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CHD8Q9HCK8 2581 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 A0A1W2PPL8 197 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 LCMT2O60294 686 aaKnown RBP8.52□□□□□ -1.05
HDAC9-229ENST00000622668 PRKD3O94806 890 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 INMTO95050 263 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 UNC5CO95185 931 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 DBIP07108 87 aaKnown RBP8.52□□□□□ -1.05
HDAC9-229ENST00000622668 HOXC4P09017 264 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-229ENST00000622668 GNALP38405 381 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF84P51523 738 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 CSNK2BP67870 215 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 CRYZQ08257 329 aaKnown RBP8.52□□□□□ -1.05
HDAC9-229ENST00000622668 NPRL3Q12980 569 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 FADDQ13158 208 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 SDK2Q58EX2 2172 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 TMEM102Q8N9M5 508 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-229ENST00000622668 GIPC3Q8TF64 312 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 MUCL1Q96DR8 90 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 UBXN10Q96LJ8 280 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 Q96MT0 163 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 POLDIP3Q9BY77 421 aaKnown RBP8.52□□□□□ -1.05
HDAC9-229ENST00000622668 DCLRE1BQ9H816 532 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 RASSF1Q9NS23 344 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 TOR4AQ9NXH8 423 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 TMEM9Q9P0T7 183 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 ROS1P08922 2347 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 H0YIV9 168 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 RGS5O15539 181 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 TYROBPO43914 113 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 GALR3O60755 368 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 LRP3O75074 770 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 TRIM3O75382 744 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 CCDC159P0C7I6 412 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 EIF2S3P41091 472 aaKnown RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 ITGADQ13349 1161 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF528Q3MIS6 628 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 UGT3A2Q3SY77 523 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 TMEM176BQ3YBM2 270 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 ISLR2Q6UXK2 745 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF547Q8IVP9 402 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 METTL4Q8N3J2 472 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 GALNT16Q8N428 558 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 C9orf43Q8TAL5 461 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 CDS1Q92903 461 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 ZC3HAV1LQ96H79 300 aaKnown RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 TMEM19Q96HH6 336 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 LCORQ96JN0 433 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF570Q96NI8 536 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 PCDHAC1Q9H158 963 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 UBQLN4Q9NRR5 601 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 AIG1Q9NVV5 245 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 GRHPRQ9UBQ7 328 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 CARD8Q9Y2G2 431 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 TRBV5-4A0A0C4DH59 114 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 LRIT2A6NDA9 550 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 FIGNL2A6NMB9 653 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 PRKNO60260 465 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 CYB5AP00167 134 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 GALK2Q01415 458 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 TLE3Q04726 772 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 ACVR1Q04771 509 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 FAM53BQ14153 422 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 LIN52Q52LA3 116 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 TPRG1LQ5T0D9 272 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 EPGNQ6UW88 154 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 LGI4Q8N135 537 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 BPIFB6Q8NFQ5 453 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 EID2BQ96D98 161 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 OMA1Q96E52 524 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 RNFT2Q96EX2 444 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 RBM24Q9BX46 236 aaKnown RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 TVP23BQ9NYZ1 205 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 IGHV5-10-1A0A0J9YXX1 117 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 PNMA8CA0A1B0GUJ8 204 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 G3V2L1 256 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 G3V2T6 193 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 GFYI3L273 518 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 HCRTR1O43613 425 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 UBL4AP11441 157 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 EEFSECP57772 596 aaKnown RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 ATP1A4Q13733 1029 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 SLC35F1Q5T1Q4 408 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 FRRS1Q6ZNA5 592 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 CARM1Q86X55 608 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 NAXEQ8NCW5 288 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 SLC46A1Q96NT5 459 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 DSN1Q9H410 356 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 MTHFD2LQ9H903 347 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-229ENST00000622668 C11orf16Q9NQ32 467 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 FBXL4Q9UKA2 621 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 PCDHA9Q9Y5H5 950 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 FOCADQ5VW36 1801 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 H0YIG0 161 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 E2F3O00716 465 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 EML2O95834 649 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 WDPCPO95876 746 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 IL2RAP01589 272 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 SLC35E2P0CK97 266 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 LIM2P55344 173 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 TRAF3Q13114 568 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms